| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2797 |
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| Symbol | |
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| ID | 7385565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 2977491 |
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| End bp | 2980376 |
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| Gene Length | 2886 bp |
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| Protein Length | 961 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643656106 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_002554231 |
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| Protein GI | 222111967 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.265518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCG CACCGCACAC CGGCGCCGTG CCGTTCGAGC TCGACGGCGA ACTCTTGCAG
GCCCTTCCGG GCGAAACCCT GTGGCAGGCC GCGCGCCGCC ACGGCGTGCA GATCCCCCAC
CTGTGCCACA CCGATGGCCT GCGGCCCGAC GGTAACTGCC GCGCCTGCGT GGTGGAGATC
GAAGGCGAGC GCACGCTGGC GCCCAGCTGC TGCCGCGCGC CCACGCCTGG CATGCGCGTG
CACGCCCAGA GCCCCCGCGC GCTCAAGAGC CAGCAGATGG TGCTGGAACT GCTGCTGTCC
GACATGCCAG AGACCGGCTA CAAGTGGAAC GATGCTGCAA AAACAATAGC TGGTAGCGCT
TGCCAGGAGA GCGCTGGAGC ACAATTTGAC CAAGTACAAA CGCCCCCGGG GCAGCATGGC
GAGTTGAGCG CCTGGGCCGA TGCGCTGGGC GTGGCCGTGC GTCCCGCGCT GGCCGCGCTG
CGCCGCGCGC AGCCCGCGCC CGACCTGAGC CACCCGGCCA TGGCCGTGCA CCTGGACGCG
TGCATCCAGT GCAACCGCTG CGTGCGCGCC TGCCGCGAGG AACAGGTCAA CGACGTGATC
GGCTATGCAC TGCGCGGAGC CGACAGCAAG ATCGTCTTCG ACCTGGACGA CCCTATGGGC
GCCAGCACCT GTGTGGCCTG CGGCGAATGC GTGCAGGCCT GCCCCACGGG CGCGCTGAGT
CCCAAGACCC ACATCGGCCC GCAGAAGGTG GACCGCACCG TGGACTCGGT CTGCCCGTTC
TGCGGCGTGG GCTGCCTCGT CACCTACCAC GTGAAGGACG AAAAAATCGT GCGCGTGGAC
GGCCGTGACG GCCCGGCCAA CCGGGGCCGC CTGTGCGTGA AGGGGCGCTT TGGCTTTGAC
TACGCGCACC ACCCGCAGCG CCTCACGGCG CCGCTGGTGC GCAAACCTGG CGTTCCCAAG
GACTGGCAGG GCGCTGTGAG GCCCGAGGAC TGGCGCGAGG TCTTCCGCGA GGCGACCTGG
GACGAGGCGC TGCAGCGCGC CGCAGGCGGA CTGCGTGCGC TGCGCGATGC GCACGGCCCC
AAGGCGCTGG CGGGGTTTGG CTCGGCCAAG GGCAGCAACG AAGAGGCCTA CCTGTTCCAG
AAGCTGGTGC GCACCGGCTT TGGCAGCAAC AACGTGGACC ATTGCACGCG CCTGTGCCAC
GCCTCCAGCG TGGCGGCGCT GCTGGAGGGC GTGGGCTCGG GCGCGGTGAG CAACCCGGTG
AGCGACGTGG CGCATGCCGA GGTCATTCTG GTGATCGGCT CCAACCCCAC ATCCAACCAC
CCCGTGGCCG CCACATGGAT GAAGAATGCC GCCCGGCGGG GTGCAAAGAT CGTGCTGGCC
GACCCGCGCG TGACCGACAT CGGGCGCCAC GCCTGGCGCG TGCTGCAGTT CCGGCCCGAC
ACCGATGTGG CCGTGCTCAA CGCGCTGATC CACACGGTGA TCGAGGAGGG CCTGGCCGAC
GAGGCCTTCA TCCGTGACCG TGCGCTCAAC TACGAGGCCC TGCGAGAGAA CGTGCGCGCC
TACAGCCCTG AGGCCATGGC GCCGCTCTGC GGCATTCCCG CGGACACGCT GCGCGAGGTG
GCGCGCGCGT TCGCCACGGC CAAGGCGTCG ATGGTCCTCT GGGGCATGGG CGTGAGCCAG
CATGTGCATG GCACCGACAA CGTGCGCTGC CTGATTGCCC TCGCCACCGT CACCGGGCAG
ATCGGCCGGC CCGGCACGGG CTTGCATCCG CTGCGCGGCC AGAACAACGT GCAGGGCGCA
AGCGACGCGG GCCTGATCCC GATGATGTTC CCCAACTACC AGCGCGTGGA CAACGCCGAG
GCGCGCGCGT GGTTCGAGCA GTTCTGGGGC TTGCCGCTGG ACGACGCGCC GGGTTACACC
GTGGTCGAGA TCATGCACAA GGCCCTGGCC GATGAGGCCG ACCCGCACAA GGTGCGCGGC
ATGTACATCA TGGGCGAGAA CCCGGCCATG AGCGACCCTG ACCTGAACCA TGCGCGCCAG
GCGCTCGCGA GCCTGGCGCA CCTCGTGGTG CAGGACATCT TCCTGACCGA AACCGCCTGG
CTGGCCGACG TGGTGCTGCC CGCCAGCGCC TGGCCCGAGA AGACCGGCAG CGTGAGCAAC
ACCGACCGCA TGGTGCAGCT GGGCCGGCGC GCGCTCACGC CACCGGGTGA CGCGCGGTCC
GATCTGTGGA TCGTGCAGCA GATGGCGAAG GGCATGGGCC TGGCCTGGGA CTACGAGGGC
GCAGAAGCTG GCGTGGCTGC CGTCTATGAG GAAATGCGCC AGGCCATGGC CGGCGCCATC
GCGGGTATCA GCTGGGACCG GCTGGAGCGC GAGTCCAGCG TGACCTACCC CTGCCTCTCG
GTCGAGGATC CGGGCCAGCC CATCGTATTC ACCGAGCGCT TTCCCACGCC CACGGGCCGC
GTCACGTTGG TGCCGGCCGA CATCATCCCG GCCGACGAGC GGCCCGATGC CGACTATCCG
CTGGTGCTCA TCACGGGCCG CCAGCTGGAG CACTGGCACA CGGGCAGCAT GACGCGGCGA
TCGGCCGTGC TGGACGCCAT CGAGCCGCAC GCTACGGCCT CGCTGCACGG CGACGAACTG
GCGCGCCTAG GGCTGGCGCC GGGCGACTGG GCGGAGATCC GCTCGCGCCG TGGTGCCGTG
CAGGTGCGTG TGCGCCGCGA CGACGGCACG CCGCGCGGTG CGGTGTTCAT GCCGTTTGCC
TATGTGGAAG CGGCGGCCAA CCTGCTCACC AATGCGGCGC TGGACCCGTT CGGTAAGATT
CCCGAGTTCA AGTATTGCGC CGTGGCCGTG CGGGGCATTG CGCAGCCGCA GAGGCAGGGC
GGCTGA
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| Protein sequence | MSAAPHTGAV PFELDGELLQ ALPGETLWQA ARRHGVQIPH LCHTDGLRPD GNCRACVVEI
EGERTLAPSC CRAPTPGMRV HAQSPRALKS QQMVLELLLS DMPETGYKWN DAAKTIAGSA
CQESAGAQFD QVQTPPGQHG ELSAWADALG VAVRPALAAL RRAQPAPDLS HPAMAVHLDA
CIQCNRCVRA CREEQVNDVI GYALRGADSK IVFDLDDPMG ASTCVACGEC VQACPTGALS
PKTHIGPQKV DRTVDSVCPF CGVGCLVTYH VKDEKIVRVD GRDGPANRGR LCVKGRFGFD
YAHHPQRLTA PLVRKPGVPK DWQGAVRPED WREVFREATW DEALQRAAGG LRALRDAHGP
KALAGFGSAK GSNEEAYLFQ KLVRTGFGSN NVDHCTRLCH ASSVAALLEG VGSGAVSNPV
SDVAHAEVIL VIGSNPTSNH PVAATWMKNA ARRGAKIVLA DPRVTDIGRH AWRVLQFRPD
TDVAVLNALI HTVIEEGLAD EAFIRDRALN YEALRENVRA YSPEAMAPLC GIPADTLREV
ARAFATAKAS MVLWGMGVSQ HVHGTDNVRC LIALATVTGQ IGRPGTGLHP LRGQNNVQGA
SDAGLIPMMF PNYQRVDNAE ARAWFEQFWG LPLDDAPGYT VVEIMHKALA DEADPHKVRG
MYIMGENPAM SDPDLNHARQ ALASLAHLVV QDIFLTETAW LADVVLPASA WPEKTGSVSN
TDRMVQLGRR ALTPPGDARS DLWIVQQMAK GMGLAWDYEG AEAGVAAVYE EMRQAMAGAI
AGISWDRLER ESSVTYPCLS VEDPGQPIVF TERFPTPTGR VTLVPADIIP ADERPDADYP
LVLITGRQLE HWHTGSMTRR SAVLDAIEPH ATASLHGDEL ARLGLAPGDW AEIRSRRGAV
QVRVRRDDGT PRGAVFMPFA YVEAAANLLT NAALDPFGKI PEFKYCAVAV RGIAQPQRQG
G
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