| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2772 |
|---|
| Symbol | |
|---|
| ID | 7385540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2951074 |
|---|
| End bp | 2952402 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643656081 |
|---|
| Product | seryl-tRNA synthetase |
|---|
| Protein accession | YP_002554206 |
|---|
| Protein GI | 222111942 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0172] Seryl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.521327 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAGACA TCCTCCTCCT TCGCAAAGAC CTCGCATCGG CCGTCGCACG GCTGGAAACC
CGCAAGAAGC CCCAGGCCTT CCTGAATGTG GAGGCGTTCC AGGCCCTGGA GTCCGAGCGC
AAGACCATCC AGATGCGCAC CGAGGAGTTG CAGTCGCAGC GCAACCAGCT GTCCAAGCAG
ATCGGCATGC TCATGGGCAA GGGTGAGAAG GACGCCGCCG AGGCTGCGAA AGCCCAGGTG
GCCGCGATCA AGGCGGAACT GGACGGTTCT GCCACCCGGC TGGATCAGAT CCAGGGCGAA
CTGCAGTCGA TGCTGGCCGC CGTCCCGAAT CTGCCGCACG AGAGTGTGCC CGTGGGCTCG
GACGAGAGCG CCAATGTGGA GGTGCGCCGC TGGAGCCCCG ATGGCCCACA GCCGCGCAGC
CTGGGCTTCA CCCCCAAGGA CCATGTGGAC CTGGGCGAGC CGCTGGGGCT GGACTTCGAC
ATGGGCGTGA AGCTCTCGGG ATCGCGCTTC ACGGTGATGA AGGGGGGCAT CGCGCGCTTG
CACCGGGCCC TTGCGCAGTT CATGCTGGAC GTGCAGACCC AGGAGCACGG CTACACCGAG
TGCTACGTGC CCTACGTCGT CAATGCGGAC TCGCTCAAGG GCACGGGCCA ATTGCCCAAG
TTCGAGGGCG ACCTCTTCGC GGCCCAGAAG GGCGGTCAGG ATGCCGAGCC CGTACCCGAC
AACGCGCAGC TGTACCTCAT CCCCACGAGC GAGGTGCCTC TGACCAACTT CGTGCGTGAC
GAAGTCTTGG CCGAGGCGCA GCTGCCGCTC AAGCTCACGG CCCATACGCC CTGCTTTCGG
TCGGAAGCCG GCAGCTACGG CCGGGACACG CGCGGCATGA TCCGCCAGCA CCAGTTCGAC
AAGGTCGAGA TGGTGCAGAT CGTGCATCCC GACAAGAGCT ACGAGGCGCT GGAGGAAATG
ACCCGCCATG CTGAGGCTGT ACTGCAGAAG CTGGGCCTGC CCTACCGCGT GATGAGCCTG
TGTACGGGCG ACATGGGCTT TGGCGCCGCC AAGACCTACG ACCTGGAAGT GTGGCTGCCC
GCCCAGAACA CCTACCGTGA GATCAGTTCG GTGAGCAACT GCGAAGCCTT CCAGGCCCGC
CGCCTGCAGG CGCGCTTCAA GAACGCGCAG GGCAAGAACG AGCTGGTGCA CACCCTCAAC
GGGTCTGGCC TGGCCGTGGG CCGCACGCTG GTGGCGGTGC TGGAGAACTA CCAGAACGAG
GACGGCAGCG TGACCATTCC CGAGGTGCTG CGCCCCTACA TGGGCGGCCA AGCCACGCTG
CCGGTCTGA
|
|---|
| Protein sequence | MLDILLLRKD LASAVARLET RKKPQAFLNV EAFQALESER KTIQMRTEEL QSQRNQLSKQ
IGMLMGKGEK DAAEAAKAQV AAIKAELDGS ATRLDQIQGE LQSMLAAVPN LPHESVPVGS
DESANVEVRR WSPDGPQPRS LGFTPKDHVD LGEPLGLDFD MGVKLSGSRF TVMKGGIARL
HRALAQFMLD VQTQEHGYTE CYVPYVVNAD SLKGTGQLPK FEGDLFAAQK GGQDAEPVPD
NAQLYLIPTS EVPLTNFVRD EVLAEAQLPL KLTAHTPCFR SEAGSYGRDT RGMIRQHQFD
KVEMVQIVHP DKSYEALEEM TRHAEAVLQK LGLPYRVMSL CTGDMGFGAA KTYDLEVWLP
AQNTYREISS VSNCEAFQAR RLQARFKNAQ GKNELVHTLN GSGLAVGRTL VAVLENYQNE
DGSVTIPEVL RPYMGGQATL PV
|
|---|
| |