Gene Dtpsy_2759 details

Gene Information

• Locus tag: Dtpsy_2759
• ID: 7385526
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 2937873
• End bp: 2938553
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643656067
• Product: Curli production assembly/transport component CsgG
• Protein accession: YP_002554193
• Protein GI: 222111929
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1462] Uncharacterized protein involved in formation of curli polymers

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGGTT CTCTCTGGCG TTGCCACGCC CTCGTCATTG CAGTCGCCGC CCTGACTGCC 
GGCTGCGTGA CCACCGAGCA ATCGCGCACC CTCGAAACTC CGAAGCCCAC CGCGTCCGCG 
CGCGCGTATC AGGGGGTGCG CAGCCCCATT TCCATTGGCA AGTTCGCCAA CCGGTCCAAC 
TTCCAACGCG GAATCTTTTC TGATGGTGTG GACCGTCTCG GCGGTCAGGC GCAAACCATT 
TTGATGACGC ACCTGCAGCA AAGCGGACGC TTTAACGTGC TCGACCGCAC CAATATGTCG 
GAAACGCAGC AAGAGGCCGC CCTCCTCAAG CAAGCACAGA CCCTCAAGGG GGCGCAGTTC 
GTCATCACGG GCGATGTCAC CGAATTCGGT CGCAAGGAAG TCGGTGACCG GCAGCTGTTC 
GGGGTGCTGG GGCGCGGCAA GGAACAGGTG GCCTACGCCA AAGTCAGCCT GAACGTAGTG 
CGCGTACAGA CCGGTGAAGT GGTCTTTGCG GCCCAGGGGG CCGGCGAATA CAGCCTGTCC 
AGCCGCGAGG TCGTAGGTTT TGGCAGCCGC GCAGGGTATG ACTCCACCCT GAACGGCAAA 
GTGCTTGACT TAGCCATCCG CGAAGCCGTG GACAAGCTCG TGAGCGGTGT CGAATCTGGC 
GCATGGGTGC CCGCACAATG A 

 

Protein sequence

MNGSLWRCHA LVIAVAALTA GCVTTEQSRT LETPKPTASA RAYQGVRSPI SIGKFANRSN 
FQRGIFSDGV DRLGGQAQTI LMTHLQQSGR FNVLDRTNMS ETQQEAALLK QAQTLKGAQF 
VITGDVTEFG RKEVGDRQLF GVLGRGKEQV AYAKVSLNVV RVQTGEVVFA AQGAGEYSLS 
SREVVGFGSR AGYDSTLNGK VLDLAIREAV DKLVSGVESG AWVPAQ