Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2747 |
Symbol | |
ID | 7385514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 2926461 |
End bp | 2928257 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643656055 |
Product | type II secretion system protein E |
Protein accession | YP_002554181 |
Protein GI | 222111917 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGCCG AAGCATTGCC CGCATCCCCC CCCACGGCCG CCGGCGGGCC CACCGGCCCG TTGCAGTGGC GGCTCATCGT CGATTGGCTG CGTGCCGATG GCGTGATCAC CGCCGAGCAG GCGCAGCGCA CCATCGCACG CTGCTCGCAG GCCGAAAGCA GCCAGCACCC GCTGGTGCGG CTGGGCAACG TGGCCATGCT GCGCGCCAGC GACGGCAAGC CGCTGGACGT GGACATCCTC ACCGAATACG TGGCCCAGCG CTGCGGCCTG GCGTTTCTGC GCATCGACCC GCTGAAGGTG GACGTGGGCC GTGTGGCCGA CGCCATGAGC GCGAGCTACG CCGAGCGCCA CAAGGTGCTG CCGGTGCAGG TGACCTCCAA GGAGGTGGTG GTGGCCACGG CCGAGCCCTT CCTGCATGAC TGGGTGGCCG AGGTGGAGCG CCAGTCCCGG CGCACGGTGC GGCGCGTGCT GGCCAACCCC CAGCACATCA CGCGCTACAC GGCGGAGTTC TATGCGCTGG CCAAGTCGGT GCGCGAGGCG CAGAAGGCCG GCGGCGGCGC CGCGGGCAGC AGCTTCGAGC AGCTCGTGGA GCTGGGCAAG ACCAACAAGC AGCTGGACGC CAACGACCAG GGGGTGGTGC GCGTGGTGGA CTGGCTGTGG CAGTACGCCT TCGACCAGCG CGCGAGCGAC ATCCACCTGG AGCCGCGCCG CGAGCAGGGC GTGATCCGCT TTCGCATCGA CGGCGTGTTG CATGCCGTCT ACCAGATGCC CATGGGCGTG CTCAATGCCA TGGTGGCGCG CGTGAAGCTG CTGGGCCGCA TGGACGTGGT GGAAAAGCGC CGCCCGCAGG ACGGCCGCAT CAAGACGCGC AACCCGCGTG GCGACGAGGT GGAAATGCGC CTGTCCACGC TGCCCACCGC TTTCGGCGAG AAGATGGTGA TGCGCATCTT CGACCCCGAC AACGCCGTGA AGGACCTGGA CGCGCTGGGT TTCACCGCGC ACGATGCGCA GCGCTGGGAG CAACTCGTCA AGCGCCCGCA CGGCATCATC CTGGTGACCG GGCCCACGGG TTCGGGCAAG ACCACTACGC TGTACTCCAC CCTGAAGCGC GTGGCCACCG AGGAGGTGAA CGTGAGCACG GTGGAGGACC CGATCGAGAT GATCGAGCCC AGCTTCAACC AGACGCAGGT GCAGCCGCAG CTGGACTTCA CCTTCGCCGA AGGGCTGCGT GCCCTCATGC GCCAGGACCC GGACGTGATC ATGGTGGGCG AGATCCGCGA CCTGGCCACC GCGGACATGG CCGTGCAGGC CGCGCTCACC GGCCACCTGG TGTTCTCCAC CCTGCACACC AACGACGCGC CCAGCGCCGT CACGCGACTC ATGGAGCTGG GCGTGCCGCC GTACCTCATC AACGCCACGC TGCTGGGGGT GCTGGCGCAG CGCCTGGTGC GCACGCTGTG CCGGCACTGC CGGCAGGTGG ACGAGGCGGC CGACCCCGAG GCGCTGGCCG ACATGATCCG CCCCTGGAAG ATCAACGGGG GCTATCGCGC CTACAAGCCC GTGGGGTGCG TGGAGTGCCG CATGACGGGC TTTCGCGGCC GCATGGGGCT TTATGAACTG CTCACCGTGA GCGAGGCGCT CAAGACCCAG GTGAACCAAT CGCCCTCCAT CGACGCGCTG CGCCGCCAGG CCGTGCAGGA CGGCATGCGC CCGCTGCGCC TGGCGGGCGC GCTGCGCGCG GCCGAGGGTG TGACCACGTT CGAGGAAGTC ATCGCCGCCA CCCCGCCGCT GGAGTAG
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Protein sequence | MTAEALPASP PTAAGGPTGP LQWRLIVDWL RADGVITAEQ AQRTIARCSQ AESSQHPLVR LGNVAMLRAS DGKPLDVDIL TEYVAQRCGL AFLRIDPLKV DVGRVADAMS ASYAERHKVL PVQVTSKEVV VATAEPFLHD WVAEVERQSR RTVRRVLANP QHITRYTAEF YALAKSVREA QKAGGGAAGS SFEQLVELGK TNKQLDANDQ GVVRVVDWLW QYAFDQRASD IHLEPRREQG VIRFRIDGVL HAVYQMPMGV LNAMVARVKL LGRMDVVEKR RPQDGRIKTR NPRGDEVEMR LSTLPTAFGE KMVMRIFDPD NAVKDLDALG FTAHDAQRWE QLVKRPHGII LVTGPTGSGK TTTLYSTLKR VATEEVNVST VEDPIEMIEP SFNQTQVQPQ LDFTFAEGLR ALMRQDPDVI MVGEIRDLAT ADMAVQAALT GHLVFSTLHT NDAPSAVTRL MELGVPPYLI NATLLGVLAQ RLVRTLCRHC RQVDEAADPE ALADMIRPWK INGGYRAYKP VGCVECRMTG FRGRMGLYEL LTVSEALKTQ VNQSPSIDAL RRQAVQDGMR PLRLAGALRA AEGVTTFEEV IAATPPLE
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