| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2710 |
|---|
| Symbol | |
|---|
| ID | 7382189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2885399 |
|---|
| End bp | 2886181 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643656019 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002554145 |
|---|
| Protein GI | 222111881 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.868345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGATA CATCGAAAGA AGTGGTGCTG AAGGTCGCGG GCATCTCCAA GCGTTTTGGC
GGCCTGCAGG CGCTGTCCGA CGTGGGCATC ACCATCCAGC GCGGCCAGGT CTATGGCCTG
ATCGGCCCCA ACGGCGCGGG CAAGACGACG TTCTTCAACG TCATCACCGG CCTGTACACG
CCCGATGCGG GCAGTTTTGA ACTGGCGGGC CAGCCCTACG AGCCCCGCGC CGTGCACCTG
GTGGCCAAGG CGGGCATTGC GCGCACCTTT CAGAACATCC GGCTGTTCGC CGACATGACG
GCGCTGGAGA ACGTGATGGT GGGGCGGCAC ATCCGCACGC ATTCCGGGCT CTTCGGGGCC
ATCTTCCGCA CCAAGAGCTT CAAGGAGGAG GAGGCGGCCA TCGCCAAGCG CGCGCAGGAG
CTGCTGGACT ACGTGGGCAT CGGCAAGTAC GCCGATTTCA AGGCGCGCAC GCTGTCGTAC
GGCGACCAGC GCCGCCTGGA GATCGCGCGC GCCCTGGCCA CCGATCCGCA ACTGATCGCG
CTGGACGAAC CCGCCGCCGG CATGAACGCC ACCGAGAAGG TGCAACTGCG CGAGCTGATC
GACCGCATCC GCAACGACAA CCGCACCATC TTGCTCATCG AGCATGACGT GAAGCTTGTG
ATGGGCCTGT GCGACCGTGT CACGGTGCTG GACTACGGCA AGCAGATTGC CGAGGGAACC
CCTGCCGACG TGCAGAAGAA CGAAAAAGTG ATCGAGGCCT ATCTGGGCAC CGGCGGGCAC
TGA
|
|---|
| Protein sequence | MADTSKEVVL KVAGISKRFG GLQALSDVGI TIQRGQVYGL IGPNGAGKTT FFNVITGLYT
PDAGSFELAG QPYEPRAVHL VAKAGIARTF QNIRLFADMT ALENVMVGRH IRTHSGLFGA
IFRTKSFKEE EAAIAKRAQE LLDYVGIGKY ADFKARTLSY GDQRRLEIAR ALATDPQLIA
LDEPAAGMNA TEKVQLRELI DRIRNDNRTI LLIEHDVKLV MGLCDRVTVL DYGKQIAEGT
PADVQKNEKV IEAYLGTGGH
|
|---|
| |