| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2701 |
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| Symbol | trmD |
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| ID | 7382180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 2879332 |
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| End bp | 2880099 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643656010 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_002554136 |
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| Protein GI | 222111872 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.257126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTTTCG ATGTCATCAC TCTGTTTCCC GAGCTGTTCG AGCCGTTTCT TGCCAGCGGC
GTGACGCGGC GCGCCTACGC GTCGGGCCAG GTAGCGGTGC GGCTGTGGAA CCCGCGCGAC
CATGCGGAGG GCAACTACCG CCGCGTGGAT GACCGGCCCT TTGGCGGCGG CCCCGGCATG
GTCATGCTGG CCGAGCCGCT GGCGCGCTGC CTGGCCGCCA TCCGCGCCGA TCGTGGCGAG
GCCGAGCAGG CGCGGGCGCC CCTGGTGCTG TTCTCCCCCA TTGGCCGCCG GCTGGACCAT
GCCGCGGTGC AGGACTGGTC CGCTGGCGCG GGTGCCATCT TGCTGTGTGG ACGCTACGAA
GGCGTGGACC AGCGTTTCAT CGACGCCTAC GTGGATGCGC AGATCAGCCT GGGCGACTTC
GTGCTTTCGG GCGGCGAGAT CGCGGCCATG GCGCTGCTGG ACGCCGTGGC GCGCCTGCAG
CCGGGCGTGT TGCACGACGA GGGTAGCCAC CAGCTCGACA GCTTCAACCC CGCGCTGGAC
GGGCTGCTGG ACTGTCCGCA CTACACGCGC CCCGAGGAAT GGGCCGGCCG CGCCGTGCCC
GCGCCGCTGC TGTCTGGCCA CCATGCGCAA ATCGAGCGCT GGCGGCGCGA TCAGCGCCTG
CTCATCACCG CGCGCCACCG CCCGGACTTG CTGCAGGCCG CGCGCGAGCG CGGGCAGCTC
ACGCGCGCGG ACGAGGCCCT CTTGGCGCAA AACGCAAGCT TGCTATAA
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| Protein sequence | MRFDVITLFP ELFEPFLASG VTRRAYASGQ VAVRLWNPRD HAEGNYRRVD DRPFGGGPGM
VMLAEPLARC LAAIRADRGE AEQARAPLVL FSPIGRRLDH AAVQDWSAGA GAILLCGRYE
GVDQRFIDAY VDAQISLGDF VLSGGEIAAM ALLDAVARLQ PGVLHDEGSH QLDSFNPALD
GLLDCPHYTR PEEWAGRAVP APLLSGHHAQ IERWRRDQRL LITARHRPDL LQAARERGQL
TRADEALLAQ NASLL
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