| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2697 |
|---|
| Symbol | |
|---|
| ID | 7382176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 2875909 |
|---|
| End bp | 2876901 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643656006 |
|---|
| Product | ribosome small subunit-dependent GTPase A |
|---|
| Protein accession | YP_002554132 |
|---|
| Protein GI | 222111868 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1162] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACTGCT CGCACCCTGA GCCCATGGCC CAAGCCCCTG CGCGCCTTGA AGGCCTGGTG
GTCGCCAGCC ACGGCCGCCA TTGCGTGGTG GAGAGCGCGG GCGGCGAGCG CCGCATCTGC
CACCCGCGCG GCAAGAAGAG CCAGGCCGTG GTGGGCGACC GCGTGCTGTG GCAGCCCGCC
GCGCCCGGCC AGGGCCGCGG CCATGGCGAC GAGGGCACCA TCGAAAAGGT GCTGGAACGG
CGCAACCTGC TGTACCGCCA GGACGAGGTG CGCACCAAGT CGTTCGCCGC CAATTTGGAC
CAGGTGCTGA TCCTGATCGC GGCCGAGCCT GTGTTCTCCG AAAGCCAACT CGCGCGCGCT
CTCATCGCCG CGGAAGCGGC GCGCATCACG CCGTTGATCG CGCTCAACAA GAGCGACCTG
GTCGAGCCGT TCGCGCGCGC CTGGGAGCGC CTGTGGCCCT ACCGCCATAT GGGGGGCGAG
CAGGACACGC AGCACCACTA CCGCGTGCTG CCGCTGTCAC TCAGCGAATC GGGGGCGGTG
GACCGCGACA TGCTGATGCA CCTGCTGGCC GGCAAGACCA CGCTGGTGCT GGGCCCCTCG
GGCGCCGGCA AGAGCACGCT GGTCAACCTG CTGGTGCCCG GCGCCTCGGC GCAGACGGGC
GAGATCTCGC AGGCCCTCAA TTCGGGCCGC CACACCACCA CCACCACCAC GCTGTACTGG
ATCGACCCGC AGCGCACTAC GGCGCTCATC GATTCGCCCG GCTTTCAGGA ATTTGGATTG
CGCCACCTCG CGCCCACCGA CCTGGCGCGC TACATGCCCG ACATCGCAGC CCATGCCGAG
GGTTGTCGCT TCTACAACTG CACCCACCTG CACGAGCCCG GGTGCGCGGT GCAGGCCCAG
GTGCGCGACG AACAAGACGC GCAGGCCATC AGCCCCCAGC GCTACCGCAT CTATGGCGAG
TTGTTTGCGG AGTTGAGCGA GAGTCCCTAC TGA
|
|---|
| Protein sequence | MHCSHPEPMA QAPARLEGLV VASHGRHCVV ESAGGERRIC HPRGKKSQAV VGDRVLWQPA
APGQGRGHGD EGTIEKVLER RNLLYRQDEV RTKSFAANLD QVLILIAAEP VFSESQLARA
LIAAEAARIT PLIALNKSDL VEPFARAWER LWPYRHMGGE QDTQHHYRVL PLSLSESGAV
DRDMLMHLLA GKTTLVLGPS GAGKSTLVNL LVPGASAQTG EISQALNSGR HTTTTTTLYW
IDPQRTTALI DSPGFQEFGL RHLAPTDLAR YMPDIAAHAE GCRFYNCTHL HEPGCAVQAQ
VRDEQDAQAI SPQRYRIYGE LFAELSESPY
|
|---|
| |