| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2674 |
|---|
| Symbol | |
|---|
| ID | 7382152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2846248 |
|---|
| End bp | 2848398 |
|---|
| Gene Length | 2151 bp |
|---|
| Protein Length | 716 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643655982 |
|---|
| Product | protein of unknown function DUF839 |
|---|
| Protein accession | YP_002554109 |
|---|
| Protein GI | 222111845 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3211] Predicted phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.136187 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCA CGATCGTTTC CGAGTACGAC GACAATGAAA TCGTCAACCA TTCGTCCAAC
CAGCACATCG ACAGCGTCCT GGCCGCGCGC TTGAGCCGTC GCAGCGCCCT CAAGGGCGGT
GTCGGCGCCA CCACTGCGGC TCTGCTGGGC GGCGTGAGCC TGAGCGCCTG CGGCGGCGGC
AGCGACGATG ACGAAACTCC CGCACCCGAG CCGATCCGCC TCAACTTCAA TGCCGTCGCC
AAGAGCAATG CCGACCTGGT AACGGTACCC GAGGGTTACC AGGTCAGCAT CCTGCACGCC
CTGGGCGACC CGATCCACTA TGGCGACGAG TCCTGGAAGG ACGATGGCTC CGAGACGGCC
GAGTCCTATG ACCGCCGCAT CGGCGACGGC CACGACGGCA TGTACTACTT CGGCATGTCC
GACGACGGCA AGTTCGACCC CAGCCGCTCC GACCGCGGCC TGCTGTGCGT GAACCATGAG
TATGTGGTTG CGCCTTATGG TCTGCATCCC ACGGGGCGCA TCACGGTGGA CGGCAAGCGC
CCGGCCGAGC AGGTGGACAA GGAAATCCGA GCCCACGGTG CCAGCGTGGT GGAAGTCAAG
CGCAAGAGCG GCAGCAACGA GATGGAGATG GTGCGCGGCT CCAAATACAA CCGCCGCATC
ACCTCGGCCA CGCCGATGGA CTTTGGCGGC CCCGCCGCCG GCAACGCCAA GCTGTTCAAC
AAGCTCTCGC CGGACGGCAA GCAGGCCTTC GGGATGAACA ACAACTGCGC CAACGGCTAC
ACGCCCTGGG GCACCTACCT GACGTGCGAG GAGAACTTCC TGAACGTCAT CGGCCGTGCC
GCCGGCGACG ACGCCCAACG CTCCGCCACC GAAATCGTGG CCCTGAAGCG CTATGGCTTG
CCCGAGAACC GCAAGAGCCC TTACCTGTGG GACACCGCCG AGGGCGAGCA GTACCAGCGC
TGGAACAGCA AGGTGAGCGC CGCCAGCGCC GCTGAGGACT ATCGCAACAT CTTCAACACC
TTCGGCTGGG TGGTGGAGAT CGACCCCTTC CGCCCCGACA GCAAGCCCGT CAAGCGCACG
GCGCTGGGCC GCTTCAACCA TGAAGGGGCA TGGCCGGCGC CCGCCAAGGC CGGCGAGCCG
ATCGTCATCT ACTCTGGCGA CGATGCGCGC AACGAGTACG TGTTCAAGTT CGTGTCCGAT
GCCAAGTGGG ATCCGAAGGA CATCAACGGC GGCGTGGCCG CCGGTGCCAA GTACCTGGAC
AAGGGCACGC TGTACGCCGC CAAGTTCAAC AACGATGGCA GCGGCGAGTG GCTGGAACTG
ACGTTCGGCA AGAACGGCAT CGACGCCACC AACGCGCTGT ACCCGTTCGC CGACCAGGCC
GATGTGGTCA TGCACTGCCG CCTGGCGGCC GACGCCCGCG GCGCGACCAA GATGGACCGT
CCCGAGTGGG GTGGCGTGAA CCCGTTGAAC AACGAGGTGT ACATGACCAT GACCAACAAC
TCGCAGCGCA CGGCCGCCAC GCTGAACGCC GCCAACCCGC GCGTGGGCAA CACCAATGGC
CACATCATCC GCTGGAAGGA AGAGGGCGGC CAGGCGGGTA CCAAGTTCCA GTGGGACGTG
TACCTGTTCG GCGCGCGCAG CGACAATAAG CAGAGCGAGA ACCTGTCGGG CCTGACCGCC
GTGAACGATT TCTCCAGCCC CGACGGCCTG CATTTCGACC AGCGCAGCGC CAATGCCGGC
GGCCTGCTGT GGATCCAGAC CGACGACGGT TCCTACACCG ATGTGACCAA CTGCATGATG
CTGGCCGCCA TTCCCGGCAA GGTCGGTGAC GGCGGCAAGG TCACCACCAA GGAGGGCCAG
GCCACGATCA TGGGCTCCAA GCCCACCGAG GCCACGGTGC GCCGCTTCCT GGTCGGCCCG
TTCGACTGCG AGATCACGGG TGTGGTGGTC ACGCCCGACG GCAAGACGCT GTTCTTCAAC
GTGCAGCACC CGGGCGAGGA CGCTGAGAAG GCCAACTTCG CCACCAGCAC CTTCACCAGC
TACTGGCCCG GCAACCAGCC TGGGATCACC AGCAGCCACA AGGGCCTCAA GCGTCCGCGC
TCGGCCACCG TGGTGGTGAC GCGCAAGGAC GGCGGCACGA TCGGTATCTA A
|
|---|
| Protein sequence | MNTTIVSEYD DNEIVNHSSN QHIDSVLAAR LSRRSALKGG VGATTAALLG GVSLSACGGG
SDDDETPAPE PIRLNFNAVA KSNADLVTVP EGYQVSILHA LGDPIHYGDE SWKDDGSETA
ESYDRRIGDG HDGMYYFGMS DDGKFDPSRS DRGLLCVNHE YVVAPYGLHP TGRITVDGKR
PAEQVDKEIR AHGASVVEVK RKSGSNEMEM VRGSKYNRRI TSATPMDFGG PAAGNAKLFN
KLSPDGKQAF GMNNNCANGY TPWGTYLTCE ENFLNVIGRA AGDDAQRSAT EIVALKRYGL
PENRKSPYLW DTAEGEQYQR WNSKVSAASA AEDYRNIFNT FGWVVEIDPF RPDSKPVKRT
ALGRFNHEGA WPAPAKAGEP IVIYSGDDAR NEYVFKFVSD AKWDPKDING GVAAGAKYLD
KGTLYAAKFN NDGSGEWLEL TFGKNGIDAT NALYPFADQA DVVMHCRLAA DARGATKMDR
PEWGGVNPLN NEVYMTMTNN SQRTAATLNA ANPRVGNTNG HIIRWKEEGG QAGTKFQWDV
YLFGARSDNK QSENLSGLTA VNDFSSPDGL HFDQRSANAG GLLWIQTDDG SYTDVTNCMM
LAAIPGKVGD GGKVTTKEGQ ATIMGSKPTE ATVRRFLVGP FDCEITGVVV TPDGKTLFFN
VQHPGEDAEK ANFATSTFTS YWPGNQPGIT SSHKGLKRPR SATVVVTRKD GGTIGI
|
|---|
| |