| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2652 |
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| Symbol | |
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| ID | 7382130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 2815785 |
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| End bp | 2818091 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643655960 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_002554087 |
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| Protein GI | 222111823 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.447412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCCGC GCTGCGCGCC ACGCGGTGAC GCGCCTGTGA GGTGGCGACA CGCCCTCGCG
GCGGCGTGTC TGGCGCTGGC CAGCACCGTC AGCCTGGCGC TGCCCACGTT CGATGAGGTG
CGCGCCGATT TCCGCTCGTC CGAGACCTTG GTGCTCTCGC GCGAGGGCGA GGTGCTGCAG
CGCCTGCGTA CCGACGCCAC CGTACGCCGC GGCCAGTGGC TGGGCGTGGC CGATGTGTCG
CCCGCGCTGC GCCAGGCGCT GGTGCTGAGC GAGGACCGGC GCTTTTACGA ACACAGCGGC
GTGGACTGGG CCGCGGTGTC GGCCGCCGCC TGGGGCAACC TGTGGAACCA GCGCACGCGC
GGCGCCAGCA CGCTGACCAT GCAGCTCGCG GGGCTGCTCG ACGGCCCGGA TGCCGATTTC
TTGCGCCAGG GCCCCGGTGG GCGCAGCGTG CCGCAGAAGC TGGGGCAGGC CGTGGCCGCG
CAGGTGCTGG ACCGCCGCTG GCGCAAAGAC CAGATCCTGG AGGCGTACCT GAACCTGGTG
CCGTTTCGCG GGGAGATCGT GGGCATCGAC GCGCTAGCGC GCACGCTGTT CGGCAAGGCC
GCGCACGGCC TGGATGAGCG AGAGGCCGCC GTGGCCGCGG CCCTGGTGCG CGCGCCCAAT
GCGCGGCCCG CATTGGTGGC CCGGCGCGCC TGCGGCGTGC TGCGCGACAT GCGACGGGCG
GGCCACAGCG GCGCGCGGGG TACCGATTGC GACGCGCTGG ACCTGTTCAC CACCGCCGCG
CTGCAGCGCC GCGCGTTCGA CGCCAGCGAG GGCATCGCGC CGCACTTTGC GCGCCAGCTG
CTGCGCCAGG CTGGGCGCAC GCAGGAGCGC GTGTCGCAAG ATGGTGCATC GCGGGATGGC
ACTGCCGCGC AGCGCGTGCG CTCCACGCTC AGCGCGCCGC TGCAGCGCAT GGCGGTGGAC
ACGCTCACGC GCCACCTGCG CGAGCTGCGC GGGCGCAACG TGGAAGACGC CGCGCTGGTG
GTGCTGGACA ACGCCACGGG CGAGGTGCTG GCCTGGGTGG GCTCGTCCGG CCCCTTGAGC
CAGGCGGCCG AGGTGGATGG CGTGCTGGCC CTGCGCCAGC CTGGCTCCAC GCTCAAGCCC
TTCCTGTACG CGCAGGCGAT TGCCGAGCGG CGGCTCACGG CCGCCTCGCT GGTGCACGAT
TCGCCCGCGC ACATCGCCAC CGCCGGCGGG CTGTACATCC CGCAAAACTA CGACCGCCAG
TTCAAGGGCT GGGTGTCCGC GCGCACCGCG CTGGCCGCCT CGCTGAACGT GCCGGCGGTA
CGCACGCTGG TGATGGTGAC GCCCGACGCC TTCTTCGAGC AACTGCGGCG CCTGGGGCTG
CCGCTGCCGG AATCGGGCGG CTATTACGGC TACAGCCTGG CGCTGGGCAG CAGCGAGGTG
CCGCTGCTGC ACCTGACCAA TGCCTACCGT GCGCTGGCCA ACGGCGGGCG CCTGAGCCCC
GTGGCCTATG CGCCTGCGCA GCGCCCGGCG TTCACGCCGG CGCTGGATGC CGGCGCGGCC
TTCATCGTGG GGGACATCCT GTCGGATGCC AACGCGCGCG TGCGCACCTT TGGCACCGAC
AGCGTGCTGG CCACGCGCTT CTGGACGGCG GTGAAAACCG GCACCAGCAA GGACATGCGC
GACAACTGGG CCGTGGGCTG GTCGCAGCGC TACACCGTGG GCGTGTGGGT GGGCAACGCC
AGCGGCGCCG CCATGCATGA CGTGAGCGGC ACCAGCGGCG CAGCGCCCAT CTGGGCCGAG
GTCATGGGCT GGCTGCATCG CAGCACGCCC AGCCGCGCGC CGCGCCCGCC ACAGGGCCTG
GTGCGGCAGG CGGTGCGCTT CGGGCCGGGC GACGGCGGCC AGCCGCTGGA GGGTGCGCGG
CAGGAGTGGT TCATGGGCGG CACGCAGCAA GCGTTATTTG CTATTGAAAG TGAAGCTGGT
GGCGCAAGCG AGACGGGCGT TACAGGCACA AATGATGCAA GTCCTGAGGC GGTAGCGGCG
CGCATCCTGG CGCCGGCGTC GGGCACCGTG GTGGCGCTGG ACCCGGACAT TCCGCCCGCG
CACCAGCGCC TGCAATTCAC GGCGGGCGGT GTGGGCCGCG CGGCGGTGCG CTGGCGCATC
GACGGGCGGA TGGCCGGCAG CGGCGCGCAG TGGGCATGGC TGCCTTGGCC GGGCCGCCAC
CGCGTGGAGC TGGTGGACGC CCAGGGCAAG GTACTGGACC AGGTGCAGAT CGAGGTGCGC
GGCGCGGGCG TGCGCGCGCG GCGCTGA
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| Protein sequence | MRPRCAPRGD APVRWRHALA AACLALASTV SLALPTFDEV RADFRSSETL VLSREGEVLQ
RLRTDATVRR GQWLGVADVS PALRQALVLS EDRRFYEHSG VDWAAVSAAA WGNLWNQRTR
GASTLTMQLA GLLDGPDADF LRQGPGGRSV PQKLGQAVAA QVLDRRWRKD QILEAYLNLV
PFRGEIVGID ALARTLFGKA AHGLDEREAA VAAALVRAPN ARPALVARRA CGVLRDMRRA
GHSGARGTDC DALDLFTTAA LQRRAFDASE GIAPHFARQL LRQAGRTQER VSQDGASRDG
TAAQRVRSTL SAPLQRMAVD TLTRHLRELR GRNVEDAALV VLDNATGEVL AWVGSSGPLS
QAAEVDGVLA LRQPGSTLKP FLYAQAIAER RLTAASLVHD SPAHIATAGG LYIPQNYDRQ
FKGWVSARTA LAASLNVPAV RTLVMVTPDA FFEQLRRLGL PLPESGGYYG YSLALGSSEV
PLLHLTNAYR ALANGGRLSP VAYAPAQRPA FTPALDAGAA FIVGDILSDA NARVRTFGTD
SVLATRFWTA VKTGTSKDMR DNWAVGWSQR YTVGVWVGNA SGAAMHDVSG TSGAAPIWAE
VMGWLHRSTP SRAPRPPQGL VRQAVRFGPG DGGQPLEGAR QEWFMGGTQQ ALFAIESEAG
GASETGVTGT NDASPEAVAA RILAPASGTV VALDPDIPPA HQRLQFTAGG VGRAAVRWRI
DGRMAGSGAQ WAWLPWPGRH RVELVDAQGK VLDQVQIEVR GAGVRARR
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