| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2642 |
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| Symbol | |
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| ID | 7384311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 2802419 |
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| End bp | 2803438 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643655950 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_002554077 |
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| Protein GI | 222111813 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.704369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACACA TTATAGGGGG CAAACCGGCC GCAGGCCGCA CCCCGCCAGA AGCCCCAGCG
GCCCGCATCG TCGAGGTCGA CGCCGAATCC GCGGGCCAGC GGCTCGACAA TTTCCTCATC
CGCCACCTGA AGGGCGTGCC CAAGACCCAC GTCTACCGCA TCATCCGCAG CGGCGAGGTC
CGCCTGAACA AGGGGCGCAC CAGCGCCGAC GCGCGCGTGG CACCGGGCGA CCTGGTGCGT
CTGCCCCCCG TGCGCGTGTC CGACAAGGTG CTGGACAAGG CGGAGCGCCC CGCGCCCGCG
CGCGAATTCC CCATCCTGCT GGAAGACGAG CACCTGATCG CCATCGACAA GCCCGCCGGC
ACGGCCGTGC ACGGCGGCAG CGGCGTGAGC TTTGGCGTGA TCGAACAGTT GCGCCAGGCG
CGCCCGCAGG CGCGCTTCCT GGAACTGGTG CACCGGCTGG ACCGGGAGAC CTCGGGCATT
TTGCTGGTGG CCAAGAAGCG CTCGGCGCTC ACACATCTGC AGGACCAGTT CCGCGGGCGC
GAGACGGGCA AGACCTATCT GGCGCTGGTC ACCGGCCACT GGCCCGCCAA CAAGAAGGTC
ATCGACACGC CGCTGCACAA ATACCTGCAG GAGGATGGCG AGCGCCGCGT GCGCGTGACC
ACGCCCGACG ACCCGGACGG CATGCGCTCC GTCACCCTGG TCAAGGTGCG CAGCCAGCTC
GCTCCGCGCC CCTTGCAGGG CCTGCCGGCG ATGAGCCTGC TGGAGGTGAC CATCAAGACC
GGGCGCACGC ACCAGATCCG CGTGCACCTG TCCTCCCAGG GCCACCCGAT CGCGGGCGAC
GACAAGTACG GCGACTTCGA CTTGAACCGG CGCCTGCAGA AGCAAGGCTT GAAACGCATG
TTCCTTCACG CATGGCGGCT ACAGTTTGAC CACCCGGCCA GCGGTGAGCG CCTGGAATTG
CGCGCCGAAT TGCCGCCCGA ACTGACCGCT TTCCTTTCCG ACGACCCTGC ACATGCCTGA
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| Protein sequence | MKHIIGGKPA AGRTPPEAPA ARIVEVDAES AGQRLDNFLI RHLKGVPKTH VYRIIRSGEV
RLNKGRTSAD ARVAPGDLVR LPPVRVSDKV LDKAERPAPA REFPILLEDE HLIAIDKPAG
TAVHGGSGVS FGVIEQLRQA RPQARFLELV HRLDRETSGI LLVAKKRSAL THLQDQFRGR
ETGKTYLALV TGHWPANKKV IDTPLHKYLQ EDGERRVRVT TPDDPDGMRS VTLVKVRSQL
APRPLQGLPA MSLLEVTIKT GRTHQIRVHL SSQGHPIAGD DKYGDFDLNR RLQKQGLKRM
FLHAWRLQFD HPASGERLEL RAELPPELTA FLSDDPAHA
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