Gene Dtpsy_2626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_2626 
Symbol 
ID7384295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand- 
Start bp2790491 
End bp2791114 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content65% 
IMG OID643655934 
Productanti sigma-E protein, RseA 
Protein accessionYP_002554061 
Protein GI222111797 
COG category[T] Signal transduction mechanisms 
COG ID[COG3073] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACG ACATGATGAT GCGAGAACAG CTGTCGGCTT TGGCCGATGG GGAGTTGCAG 
GGCGAAGAAT TTGCGCACGC GCTCACCTAT GCCGCGAACG CCGAGGGGCG GGCGACGTGG 
CAGCTCTACC ATTTGATAGG TGACACCCTG CGCAGTTCTG AAGCAGCGGG CATGGGAGAC 
CTTGAACTCG TAGACCGCCT GCGCACGCAA CTGGCGCGCG AACCGGCGCC CCGTTTGGCG 
GCCGTGGAAG TAGGTCACGT GGCCTCTATG AAGGTGGGGC GGACGAAAGA CAACGCAGCC 
AACGCCGCAG TGTTCCGCTG GAAGGTGGCG GCAGGGTTCG CGTCGTTTGC CGCAGTCGCG 
GCTGTTGGAT GGAGTGTTTA TCTGGGCGTC GAAGGTGACG GCCGCGCGGC AGGCGCGCAG 
TTGGCGGCGG CCCAGCCAGT CATGACGGCC ACGGCGCCCG CTCTGCTGGC CACAGCCGCC 
GGCCCTGATG GGCAACAGGT CATGTTGCGT GATCCGCGTC TGGATGAGTT GCTCGCGGCG 
CACAAGCAGT TTGGCAGCAC GACCGCACTG CAGATGCCCG CAGGCTTCCT GCGGAACGCC 
ACGTTTGAAG CGCCTGCGCG CTAA
 
Protein sequence
MNDDMMMREQ LSALADGELQ GEEFAHALTY AANAEGRATW QLYHLIGDTL RSSEAAGMGD 
LELVDRLRTQ LAREPAPRLA AVEVGHVASM KVGRTKDNAA NAAVFRWKVA AGFASFAAVA 
AVGWSVYLGV EGDGRAAGAQ LAAAQPVMTA TAPALLATAA GPDGQQVMLR DPRLDELLAA 
HKQFGSTTAL QMPAGFLRNA TFEAPAR