| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2598 |
|---|
| Symbol | |
|---|
| ID | 7384267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 2760696 |
|---|
| End bp | 2762009 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643655906 |
|---|
| Product | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| Protein accession | YP_002554033 |
|---|
| Protein GI | 222111769 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGC CTGTTGTCAC CTCCCGACCC TGCGCCGAAC CCGACCCGGC ACGGCGTGAT
GGCGCGCTGT TGTGGTGGAG CCTGCTCGGC CTGTTGCCTC AAGCGCTGGG TTACGCCATA
GCGCACAAGA TGCAACACGC AGGCTGGGTC ACACCGCTGT TCCCCGCCAC CGTGCTGTGG
TGTGCGGTGT CCTACCTGTT GGCAACACGC TGGCTGCACC AGGGTGCCCA TCTACCGCCG
CGGGAGCAGG GTGGCTTTTT GCTGGTGGTG ATCACGGTGG CCTTTCTGCT CACCCCGTTG
GGCTTTGCAC TGCTGCAAGC GCCCTATTCG CGCGGCGCCG TATTGATGGC CTACATGCTG
GCCTTGGCTT GGCTGCTGTG CGGGCATGCG CTGTGGGGGA CCCGTCGTAC GCTGCACCTG
GCCTACGTGG ATGCCGACTT ACCCTACGTC CTGCGCCAAA TGCTGCGCCC GCAGGAGCAA
GGCGATGACC GACTGCGCCT GACCAGCTGG GTGGCCGGAC TACCAGCGCG AAAACAGCGC
GTAGCCGTGG ACGGTGTGGT GCTAGACCGG CTGGCTGATC CCGACCCGCA ACGCCAACAA
TGGATCAGCG AGCTCAAACT CCAGCGCATC CCTCTCTACA GCGCAGAAGC GGCAGCGGAA
ATGCTGTCGG GCCGCAAAAT CACCGGGACG CTGGGCGAGC AAGATCTATG GCAACTGACC
AATTACCCTG CTTACGACAT CGCCAAGCGC ATGCTGGACT TGGGCCTGAC CCTCATCACG
GTGCCGCTAT GGGTTCCGCT GTGTATGGCC GCGGGGCTGG CAGTGAAGTT CGATTCACCC
GGCCCCATGT TGTACTCGCA GCAGCGCATG GGTCGCCACG GACGCAGCTT CCGCATATGG
AAGCTGCGCA GCATGCGTCA CGAGCCTGCC AGCCACATCG TTCAGTTCGC CAAACAGCAG
GACGACCGTA TCACGTCAGT TGGCCGCTTC ATCCGCCGCA CGCGGCTCGA TGAACTACCC
CAGCTCTGGA ACGTACTGCG CGGAGAAATG AGCCTCATCG GCCCCCGTCC CGAGCAGGCA
GAGTTCGCGC ACCACTTTGC CGCAGCCATG CCCGCCTACC CCTACCGCCA CTTGATGCGC
CCCGGTCTCA CGGGCTGGGC GCAGGTGCAG CATGGCTATA CCGATAGCGC CGAGCAGACC
GCTATCAAGC TGAGCTATGA CCTGTATTAC GTGACGCACT GCTCCATGGC TCTGGATCTG
CTCATTGCCT ACAAGACGGT GCGCACGGTG CTCACAGGTT TCGGAGCGCG CTAG
|
|---|
| Protein sequence | MTQPVVTSRP CAEPDPARRD GALLWWSLLG LLPQALGYAI AHKMQHAGWV TPLFPATVLW
CAVSYLLATR WLHQGAHLPP REQGGFLLVV ITVAFLLTPL GFALLQAPYS RGAVLMAYML
ALAWLLCGHA LWGTRRTLHL AYVDADLPYV LRQMLRPQEQ GDDRLRLTSW VAGLPARKQR
VAVDGVVLDR LADPDPQRQQ WISELKLQRI PLYSAEAAAE MLSGRKITGT LGEQDLWQLT
NYPAYDIAKR MLDLGLTLIT VPLWVPLCMA AGLAVKFDSP GPMLYSQQRM GRHGRSFRIW
KLRSMRHEPA SHIVQFAKQQ DDRITSVGRF IRRTRLDELP QLWNVLRGEM SLIGPRPEQA
EFAHHFAAAM PAYPYRHLMR PGLTGWAQVQ HGYTDSAEQT AIKLSYDLYY VTHCSMALDL
LIAYKTVRTV LTGFGAR
|
|---|
| |