| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2587 |
|---|
| Symbol | |
|---|
| ID | 7384256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 2748477 |
|---|
| End bp | 2749250 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643655895 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_002554022 |
|---|
| Protein GI | 222111758 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCACC AACCGTCCCT CTCCCAGCGC GTCGCCATCG TCACCGGCGC CAGCTCCGGC
ATCGGCCGCG CAGCGGCCCT GCTTTTCGCG GAGGCCGGTG CGGCCGTCGT CGTGGGCGCA
GGGCGCCAAG CGGAGCTGGA CCAACTCGTC GCTGCCATCA CCCAGCAGGG AGGGTCGGCT
GCGGCAGTGG CCGGCGACGT GCGCGACGAA GCCTACGCAC AAGCGCTCGT CGCCACTGCC
GTGGAGCGTT TTGGCGGCCT CGATATCGCC TTCAACAATG CGGGCACCAT GGGGCCGCTG
CAACCCACGC CGGACGTGCA GTCGAGCGAT TGGCGCGACA CCCTGGAGAC CAACCTCACC
AGTGCCTTCC TGGGCGCCAA GCACCAGATT CCCGCAATGC TGGCGCGCGG AGGTGGTTCG
ATCATCCTCA CCTCCACCTT CGTGGGGTAC ACCGCCGCAT TTGCGGGCAC GGCCGCGTAT
GCCGCGAGCA AGGCCGGCCT GATCGGCCTG ACCCAGGCAC TGGCCACGGA GTTCGGAGCG
AAGGCCATCC GTGTGAATGC CTTGCTGCCC GGCGGCACCC TCACCCCCAT GGCGCGCGCC
ATGAACGGAA CACCCGAGGC GCTGGCCCAG GTCGCCCAAC TGCATGCACT CAAGCGCCTG
GCACAGCCCC GGGAGATTGC CCAGGCCGCG TTGTACCTGG CGTCCGACGC GGCATCGTTC
GTCACCGGGA CAGCCATGCT GGTGGATGGC GGGGTGTCCA TCCAGCGGGG ATGA
|
|---|
| Protein sequence | MSHQPSLSQR VAIVTGASSG IGRAAALLFA EAGAAVVVGA GRQAELDQLV AAITQQGGSA
AAVAGDVRDE AYAQALVATA VERFGGLDIA FNNAGTMGPL QPTPDVQSSD WRDTLETNLT
SAFLGAKHQI PAMLARGGGS IILTSTFVGY TAAFAGTAAY AASKAGLIGL TQALATEFGA
KAIRVNALLP GGTLTPMARA MNGTPEALAQ VAQLHALKRL AQPREIAQAA LYLASDAASF
VTGTAMLVDG GVSIQRG
|
|---|
| |