Gene Dtpsy_2540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_2540 
Symbol 
ID7384811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand+ 
Start bp2704950 
End bp2705372 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content63% 
IMG OID643655848 
Productfimbrial protein pilin 
Protein accessionYP_002553975 
Protein GI222111711 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACC AGCAACAAGG CTTTACCCTG ATCGAGTTGA TGATCGTGGT GGCGATCGTC 
GGAATCCTCT CGGCCATCGC CTACCCCAGC TATACCGAGT ACGTGCGGCG CGGCCACCGT 
GCGGATGCGC GCGCCGGGCT GCTACAGGCG CAGCAGTGGC TGGAACGGGC GGCGACAGCC 
CAGGGGGTGT ATCCCACCGC ACTGCCGATT GCCCTGACAT GGTCAGGAGA CACCACCAAG 
CGATATGACA TTGCCTTTCA AGCGGGTAAC ACCAATGCCG CTTTCACGCT TACGGCCGCA 
CCCAAGGGCG CGCAGACGGG CGACAAATGC GGCACCTACA CGCTGAGCAA TACCGGCGTG 
CGTGGCGCCG CCGGCAAGAA ATCTGGCGAC ACCGGCTACA ACCCCGACTG CTGGGGCAAG 
TAA
 
Protein sequence
MKHQQQGFTL IELMIVVAIV GILSAIAYPS YTEYVRRGHR ADARAGLLQA QQWLERAATA 
QGVYPTALPI ALTWSGDTTK RYDIAFQAGN TNAAFTLTAA PKGAQTGDKC GTYTLSNTGV 
RGAAGKKSGD TGYNPDCWGK