Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2536 |
Symbol | |
ID | 7384807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 2698689 |
End bp | 2699402 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643655844 |
Product | type IV pilus modification protein PilV |
Protein accession | YP_002553971 |
Protein GI | 222111707 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4967] Tfp pilus assembly protein PilV |
TIGRFAM ID | [TIGR02523] type IV pilus modification protein PilV [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCAAC AACTGAAACC CATGCCCCAA AAAGCTCGCC AGCGCGGCAT TACCCTCATC GAATCGCTTG TCGCCATCGT CGTCGCTGCC CTGGGCATCC TGGGCGTTGT GGGCGTGCAG ATGCGCACCC TGAGCGACAC ACAAACCACC GTGCGCCGCG CGCAGGCCAT CCGCCTTATC GAAGACCTGA GCGAACGGCT GAAAGTGCAC CCCAACGCCC TCAACGCCGT CAACCCCACG GCCGGGGGCA CACAAAGCTA CGTGGGCGAC ACCTGGGCCT CCGCACTGAC GGCACCTGGC ACCAACTGCG CCACAGGCCA ATGCACGCCC GACCAGCTCG CCGCCTATGA CCTGTGGGCC TGGCGCACGC TGGTGCGCAG CAGCCTGCCC GCGGGCGACG GCGTGGTCTT TCTCACCCAA GGTGAGGATG GCGACGCGGG CAACCAGCGG CAGCTCGGCG TGATGCTCCG CTGGCGCGAG AACGAGCGCG ATATTGCCGA TGCCGATGAC AAAAAAATTC ATAGAGACAA TATCGACGCC GCCCAGGCCA AGAAAACCGA TGGCACCTTC ATTAGCGGCA CGGGAAAAAC CGCACTGGAC AACGGCTGCG GCACGGCGGG CTTCACCTGC CACCTGCAAT ACATCCCTAT CAGCGCCCGC TGCGCTCCCG ATTTCTGGGC CGGCCAAACC TGGCACTTCT GTGCAGGCGC CTGA
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Protein sequence | MPQQLKPMPQ KARQRGITLI ESLVAIVVAA LGILGVVGVQ MRTLSDTQTT VRRAQAIRLI EDLSERLKVH PNALNAVNPT AGGTQSYVGD TWASALTAPG TNCATGQCTP DQLAAYDLWA WRTLVRSSLP AGDGVVFLTQ GEDGDAGNQR QLGVMLRWRE NERDIADADD KKIHRDNIDA AQAKKTDGTF ISGTGKTALD NGCGTAGFTC HLQYIPISAR CAPDFWAGQT WHFCAGA
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