Gene Dtpsy_2536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_2536 
Symbol 
ID7384807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp2698689 
End bp2699402 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content64% 
IMG OID643655844 
Producttype IV pilus modification protein PilV 
Protein accessionYP_002553971 
Protein GI222111707 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4967] Tfp pilus assembly protein PilV 
TIGRFAM ID[TIGR02523] type IV pilus modification protein PilV
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCAAC AACTGAAACC CATGCCCCAA AAAGCTCGCC AGCGCGGCAT TACCCTCATC 
GAATCGCTTG TCGCCATCGT CGTCGCTGCC CTGGGCATCC TGGGCGTTGT GGGCGTGCAG
ATGCGCACCC TGAGCGACAC ACAAACCACC GTGCGCCGCG CGCAGGCCAT CCGCCTTATC
GAAGACCTGA GCGAACGGCT GAAAGTGCAC CCCAACGCCC TCAACGCCGT CAACCCCACG
GCCGGGGGCA CACAAAGCTA CGTGGGCGAC ACCTGGGCCT CCGCACTGAC GGCACCTGGC
ACCAACTGCG CCACAGGCCA ATGCACGCCC GACCAGCTCG CCGCCTATGA CCTGTGGGCC
TGGCGCACGC TGGTGCGCAG CAGCCTGCCC GCGGGCGACG GCGTGGTCTT TCTCACCCAA
GGTGAGGATG GCGACGCGGG CAACCAGCGG CAGCTCGGCG TGATGCTCCG CTGGCGCGAG
AACGAGCGCG ATATTGCCGA TGCCGATGAC AAAAAAATTC ATAGAGACAA TATCGACGCC
GCCCAGGCCA AGAAAACCGA TGGCACCTTC ATTAGCGGCA CGGGAAAAAC CGCACTGGAC
AACGGCTGCG GCACGGCGGG CTTCACCTGC CACCTGCAAT ACATCCCTAT CAGCGCCCGC
TGCGCTCCCG ATTTCTGGGC CGGCCAAACC TGGCACTTCT GTGCAGGCGC CTGA
 
Protein sequence
MPQQLKPMPQ KARQRGITLI ESLVAIVVAA LGILGVVGVQ MRTLSDTQTT VRRAQAIRLI 
EDLSERLKVH PNALNAVNPT AGGTQSYVGD TWASALTAPG TNCATGQCTP DQLAAYDLWA
WRTLVRSSLP AGDGVVFLTQ GEDGDAGNQR QLGVMLRWRE NERDIADADD KKIHRDNIDA
AQAKKTDGTF ISGTGKTALD NGCGTAGFTC HLQYIPISAR CAPDFWAGQT WHFCAGA