Gene Dtpsy_2517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_2517 
Symbol 
ID7384788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand+ 
Start bp2677002 
End bp2677652 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content68% 
IMG OID643655826 
Productendonuclease III 
Protein accessionYP_002553953 
Protein GI222111689 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCCC AGGACATCGA GCCCTTCTTC GCGGCGCTGC AGGCCGCCAA CCCGCAGCCC 
AACACCGAGC TGGAATACAC CAACGTGTTC GAGCTGCTGG CCGCCGTGCT GCTGTCGGCG 
CAGGCCACCG ACGTGGGGGT GAACAAGGCC ACGCGCCGGC TGTTTCCCGT CGCCAATACA 
CCGCAGGCCG TTCTGGAGCT GGGCCTGGAC GGCCTGGAGG GTTACATCAA GACCATCGGC 
CTGTACCGCA CGAAGGCGAA GAACCTGATG CAGACCTGCC GCATCCTGGT GGAGCAGCAC 
GGCGGCCAGG TGCCGCGCAC GCGCGAGGCG CTGGAAGCCC TGCCCGGCGT GGGCCGCAAG 
ACCGCCAACG TGGTGCTGAA CGTGGCGTTC GGCCAGCCCA CCATGGCGGT GGACACGCAC 
ATCTTCCGCG TGGGCAACCG CACCGGCCTG GCGCCCGGCA AGAACCCGCT GGCCGTGGAG 
ATGCAGCTGC TGCAGCGCGT GCCACCGCAG TATCTGGTGG ACGCCCACCA CTGGCTAATT 
CTGCTGGGCC GCTACGTGTG CCAGGCACGC AAACCGCGCT GCTGGGAATG CGTGGTCGCA 
CCCTGGTGCG ACTACGAGCC GAAGACGCCG GCGCCGTTCA ACGCGGGCTG A
 
Protein sequence
MKPQDIEPFF AALQAANPQP NTELEYTNVF ELLAAVLLSA QATDVGVNKA TRRLFPVANT 
PQAVLELGLD GLEGYIKTIG LYRTKAKNLM QTCRILVEQH GGQVPRTREA LEALPGVGRK 
TANVVLNVAF GQPTMAVDTH IFRVGNRTGL APGKNPLAVE MQLLQRVPPQ YLVDAHHWLI 
LLGRYVCQAR KPRCWECVVA PWCDYEPKTP APFNAG