| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2501 |
|---|
| Symbol | |
|---|
| ID | 7384772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 2661522 |
|---|
| End bp | 2663027 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643655810 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_002553937 |
|---|
| Protein GI | 222111673 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCA CCCACGACGC GCCTTCCGAT GCCACCAGCC CCGCGCCGCT GGAAACGTCC
GCCAGCCGGC GGGCCCAGCG TGCACGCGTG GGGCTGAACC TCTTCTGGCG CACTTTCTTC
CTGCTGGCCG TGCTGCTGAT CGGCAGCATC ATGGCGTGGC TGCAGACGCT GCGCGCGCTG
GAGTTCGAGC CCCGCGCCCT GCAGACGGCG CAGCAGATTG CATCGCTGGT CAACCTGAGC
CGCGCGGCGC TCATCCACTC CGATGCCATC GCGCGTGTGT CGCTGCTCAA GACCATGGCC
GACCAGGAGG GCGTGCGCAT CCTGCCGCGC GAGCCGGGTG ACAAGTTCGA GCTGCTCTCG
CCCTCCCCGC TCGGCTCGCG CCTGACCGAA GAACTCACCC AGCGCCTGGG GCCCGGCACC
ATCGTGGCCG CCAGCGTGAA TGGCGAGACG GGGCTGTGGG TGGGCTTCAC CATCAATGGC
GACCCGAACT GGATGCTGAT GGACCGTTCG CGCCTGAGTG CCGCTGGCGG CAAGACCTGG
ATGATCTGGT TGATCACCGC GGGCGCGCTG TCGCTGGCGG GTGCCGCCGT CATCGCGCGG
CTGATCAACC GCCCGCTCAA GCAGCTCAGC GACGCGGCCA ACCGCGTGCG CGACGGCGAC
TTTGCCAACA GCCGCCTGGA CGAAGAGGCC GTGACCAGCG AGATCCGCGA GGTCAACATC
GGCTTCAACC GCATGGCGCA AAAGCTCGCC AAGCTGGAGC AGGACCGCGC GGTGATGCTG
GCCGGCATCT CGCACGACCT GCGCACGCCG CTGGCGCGGC TGCGCCTGGA AACCGAGATG
AGCGTCACCG ACGACGTGGC GCGCGAGCAC ATGGTGGCCG ACATCGTGCA ACTGGACGCC
ACCATCGACA AGTTCCTGGA CTATGCGCGG CCCGACACCA CGGTGGCCCT GAGCCCTGTC
AACCTGCATG GCGTGGTGTC GTCCTGCGTG TACGCGGTGC AGGACCACCG CGAGCTGCAG
ATCTCGATGA ACGTGCCCGA GGACCTGATC GTGATGGCCG ACGAGGTGGA GCTGGCGCGC
GTGATCTCCA ACCTGCTGGA GAACGCCCGC CGCTACGGCA AGAACCGCGA AACCGGCATC
ACCACCGTGG ACATCGCCGC CAAGGCGCGC GAGAAGTGGG TGCTGGTGAA GCTGCGCGAC
CACGGACCCG GCGCACCACC CGAGCAACTG GCCAACCTCA CCAAGCCGTT CTTTCGCGGC
GACTCCGCGC GCACGGCCGC CGCTGGCGCG GGCCTGGGCC TGTCGATCGT GGACAAGACC
GTGCAGCGCA TGGGCGGCAT CTTCGCGCTG GCCAACTCGG GCTCGGGCGG GCTGGTCGCC
CACATCCAGT TGCAGCGCGC GATGAACTTG CGGCAGGGCC AAGACCCCCA GCAGCGCCTG
CAGCGCCCGC AGATCAAGCG CCACCTGCCA CCGCGCAGCG GTGTGCCGTC ATCCCAGCAA
AATTGA
|
|---|
| Protein sequence | MSATHDAPSD ATSPAPLETS ASRRAQRARV GLNLFWRTFF LLAVLLIGSI MAWLQTLRAL
EFEPRALQTA QQIASLVNLS RAALIHSDAI ARVSLLKTMA DQEGVRILPR EPGDKFELLS
PSPLGSRLTE ELTQRLGPGT IVAASVNGET GLWVGFTING DPNWMLMDRS RLSAAGGKTW
MIWLITAGAL SLAGAAVIAR LINRPLKQLS DAANRVRDGD FANSRLDEEA VTSEIREVNI
GFNRMAQKLA KLEQDRAVML AGISHDLRTP LARLRLETEM SVTDDVAREH MVADIVQLDA
TIDKFLDYAR PDTTVALSPV NLHGVVSSCV YAVQDHRELQ ISMNVPEDLI VMADEVELAR
VISNLLENAR RYGKNRETGI TTVDIAAKAR EKWVLVKLRD HGPGAPPEQL ANLTKPFFRG
DSARTAAAGA GLGLSIVDKT VQRMGGIFAL ANSGSGGLVA HIQLQRAMNL RQGQDPQQRL
QRPQIKRHLP PRSGVPSSQQ N
|
|---|
| |