Gene Dtpsy_2496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_2496 
Symbol 
ID7384767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp2655666 
End bp2657909 
Gene Length2244 bp 
Protein Length747 aa 
Translation table11 
GC content68% 
IMG OID643655805 
Product(p)ppGpp synthetase I, SpoT/RelA 
Protein accessionYP_002553932 
Protein GI222111668 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGCA GTTCCATCGG CCATCTGCCC ATGGGGCAGG GCGCGGCCGC CGGGCCCCGA 
CCCGAGGCGG TGCCGCAGCT CATCGCAGCC ACCGCGCAGG CGGGACCGGA GCATGCCGAC
GCCCTGGTGC GCGCCCGCGC CTTTGCCGAG CCGCTCTTGA TCGGCGAAAC GTTGGAAACC
GGAGAGAACA CCCTCGTCCA TGCCGATGCG GTGTCCGCCA TCCTCAAGCA CCTGGGCGGC
TCGGAAACCA TGCAGGCGGC GGTCTATCTG GTGTATGCCT GCTCGCACCT GAACAAGCCC
GAGGAAGTGA TCACCAAGGC CTTCGGTAGC AATTTCGCCG CGCTGGCGCT GGAGACCACC
AAGCTCATGC GCGTGCAACT GCAGGCGCGC GAGGCGCAGG TGACGGGCCA GCAGGTGGAC
GATGCGGCCA CGCAGACCGA GAACGTGCGC AAGATGCTGC TGGCCTTCTC GCGCGACCTG
CGCGTGGTGA TGCTGCGCCT GGCGTCCCGC CTGCAGACGC TGCGCTTTTA TGCCGCAGCC
AAGCGCCCGG TATCGCCGGC CATCGCGCGC GAGGCGCTGC AGGTGTTCGC GCCGCTGGCC
AACCGCCTGG GCATCTGGCA GATGAAGTGG GAGCTGGAAG ATCTGGCCTT CCGCTTCCTG
GAGCCCGAGA CCTATAAGGA GGTGGCCCGC CTGCTCGACG AGAAGCGCGT GGAGCGCGAG
CTGTACATGG AGCAGGTGCG CAGCCGGCTG GAGTCCGAGT TGCGTGCGCG CAGCATCAGT
GCCAGCGTGC AGGGCCGGCC CAAGCACATC TACAGCATCG TCAAGAAGAT GCGCGGCAAG
TCGCTGAACT TCGACCAGGT GTTCGACATC CGTGCGCTGC GTGTGGTGGT GCCCAGCGTC
AAGGACTGCT ATGCCGCCTT GAGCTGGGTG CACAGCCAGT TCAAGCCCAT CGAGGCGGAG
TTCGACGACT ACATCGCCCG CCCCAAGCCC AACGGCTACC AGTCGCTGCA CACCGTGGTG
CGCGACGAGG CGGGCAAGGC CATCGAGATC CAGATCCGCA CCCAGGCCAT GCACGACCAT
GCCGAGCATG GCGTGGCCGC GCACTGGGCC TACAAGGAGG CGGGCACCAA GGGCTACGCT
GGCGTGTCGG CCAGCAGCGA GTACGACGCC AAGATCGCCG TACTGCGCCA GCTGCTGGCG
TGGGAGCGCG ACCTGGTGGG CTCCGCCAGC CGCAGCGGGT TGTTCGAAGA CCGCATTTAT
GTGCTGACCC CGGACGCGGC CGTGGTGGAA CTGCCCCAGG GCGCCACGCC CGTGGACTTC
GCCTATGCCG TGCACACCAG CGTCGGCCAC CGCTGCCGGG GTGCGCGTGT CGACGGCAAC
ATGGTTCCGC TGAACACGCC GCTGCAGAAC GGCCAGACGG TGGAGATCAT CACCGTGAAG
GAAGGGCGTC CTTCGCGCGA CTGGCTCAAC CCGGAACTGG GCTACCTCAC CAGCAACCGC
GCGAAGGCCA AGGTGCGCGC GTGGTTCAAC GCACAGGCCA CCCATGCCAC GGTGGCGCGC
GGCCGCGAGC TGGTGGAAAA GCTGCTACAG CGCGAGGGCA AGACGGCCCT CAAGCTTGAC
GACCTGGCGG TGCAGCTGGG CTTCAAGTCG GCCGAGGCCT TGTTCGAAGT GGTGGGCAAG
GACGAATTCT CGCTGCGCAG CATCGAGACC CTGTTGCGCC CACCCGAGCC GGCGGTCGAT
GAGCCTGACG TGCTGCTCAA GAAGGCGCGC ACACCCGACG GCGCGCCCAA GGGCGGCGTG
CTGGTGGTGG GCGTGGATTC CCTCATGACG CAGTTGGCCA AGTGCTGCAA ACCCGCGCCG
CCCGATGAGA TCCGTGGTTT CGTCACGCGC GGCAAGGGCG TGAGCGTGCA CCGCGCCGAC
TGCAGCAATT TCCGCGAGAT GGCGGCGCGC AATGCGGAGC GCGTGATCGA CGTGGAGTGG
GGAAAGTCGC AGCGCGCCGC CGGAGAAGCC GCCGTCTACC CCGTGGACGT GGCGGTGGAA
GCCTCGGACC GCCAGGGCCT GCTGCGCGAC ATCTCGGAAG TGTTCGCGCG CGAGAAGACC
AACGTCATCG GCGTGCAGAC ACAGTCCGTC AAGGGAACGG CATGGATGAC CTTCACCGTG
GAAGTGTCCG ATGCGGGGCG GCTCAACAAG GTGCTGGGTA TCGTGGCCGC GGTGCAGGGG
GTGCGGTCGG CGCGCCGGCG ATGA
 
Protein sequence
MKSSSIGHLP MGQGAAAGPR PEAVPQLIAA TAQAGPEHAD ALVRARAFAE PLLIGETLET 
GENTLVHADA VSAILKHLGG SETMQAAVYL VYACSHLNKP EEVITKAFGS NFAALALETT
KLMRVQLQAR EAQVTGQQVD DAATQTENVR KMLLAFSRDL RVVMLRLASR LQTLRFYAAA
KRPVSPAIAR EALQVFAPLA NRLGIWQMKW ELEDLAFRFL EPETYKEVAR LLDEKRVERE
LYMEQVRSRL ESELRARSIS ASVQGRPKHI YSIVKKMRGK SLNFDQVFDI RALRVVVPSV
KDCYAALSWV HSQFKPIEAE FDDYIARPKP NGYQSLHTVV RDEAGKAIEI QIRTQAMHDH
AEHGVAAHWA YKEAGTKGYA GVSASSEYDA KIAVLRQLLA WERDLVGSAS RSGLFEDRIY
VLTPDAAVVE LPQGATPVDF AYAVHTSVGH RCRGARVDGN MVPLNTPLQN GQTVEIITVK
EGRPSRDWLN PELGYLTSNR AKAKVRAWFN AQATHATVAR GRELVEKLLQ REGKTALKLD
DLAVQLGFKS AEALFEVVGK DEFSLRSIET LLRPPEPAVD EPDVLLKKAR TPDGAPKGGV
LVVGVDSLMT QLAKCCKPAP PDEIRGFVTR GKGVSVHRAD CSNFREMAAR NAERVIDVEW
GKSQRAAGEA AVYPVDVAVE ASDRQGLLRD ISEVFAREKT NVIGVQTQSV KGTAWMTFTV
EVSDAGRLNK VLGIVAAVQG VRSARRR