Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2480 |
Symbol | |
ID | 7383982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 2635766 |
End bp | 2636881 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643655788 |
Product | TRAP dicarboxylate transporter- DctP subunit |
Protein accession | YP_002553916 |
Protein GI | 222111652 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.35175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGAGC AGACCAAGAC CCCAGGCCGC CGAAACCTAC TCAAGGGTGC TGCGGTTGCC GCGGGAGCCA TGTCCGTGCC CATGATCAGC ACGGCCCAGA CCACGGTGTT CCGATTCCAG AGCACCTGGC CCGCCAAGGA TATCTTTCAC GAGTTCGCGG GAGACCTGGC CAAGAAGATC AACGACATGG CGGGCAGCCG CCTGAAGATC GAGGTGTTGC CCGCGGGTGC CGTGGTGCCG GCCTTCCAGT TGCTGGATGC CGTGGCCAAG GGCACGCTGG ACGGTGGCCA TGGCGTGGTG GCCTACTGGT ACGGCAAGAA CCAGGCCGTG GCGCTGTGGG GCTCGGGCCC GGCCTTTGGC CTGGATGCCA ACGGCGTGCT CGCGTGGCAT TACTACGGCG GCGGTAAGGA GCTGCTCGAC GAGATCTACA AGAGCCTGAA CCTGGACGTG GTCTCCAAGC TCTACGGCCC CATGCCCACG CAGCCGCTAG GCTGGTTCAA GAAGCCGGTG GCACGCGTGG AAGACCTCAA GGGTTTGAAG TTCCGCACCG TGGGGCTGGC GGTGGACGTG TTCACCGAGA TGGGCGTGGC CGTGAACCCG CTGCCCGGCG GCGAGATCGT GCCCGCGCTG GACCGCGGCC TGCTGGATGC GGCTGAGTTC AACAACGCCT CCAGCGACCG CGTGCTGGGC TTTCCCGACG TGGCCAAGAA CTGCATGTTG CACAGCTTCC ACCAGTCCAG CGAGCAGTTC GAAGTGCTGT TCAACAAGAG CAAGTACGAC GCGCTGTCGT CGGAGCTGAA GGCGGTCATC GACTACGCCG TGCAGGCCGC CAGCGCCGAC ATGAGCTGGA AGGCCGCCGA CCGCTACGCC AAGGACTATG CCGAGATGCA ATCCAAGCAG GGGGTGAAGT TCTACAAGAC GCCGGACGCC ATCCTGCGCG CGCAGTTGGC CGCCTGGGAC AAGGTCACGG CCAAGAAAGC CGAAGAGAAC GCCATGTTCA AGAAGGTGAT GGACTCCATG CGCACCTTTG CGCAGAGGAG CGGCCGCTGG AAGAACGACA CCGACGTCGA CTTCAAGATG GCCTGGAACC ACTACTTCGC GCAGCGCAAG AGCTGA
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Protein sequence | MTEQTKTPGR RNLLKGAAVA AGAMSVPMIS TAQTTVFRFQ STWPAKDIFH EFAGDLAKKI NDMAGSRLKI EVLPAGAVVP AFQLLDAVAK GTLDGGHGVV AYWYGKNQAV ALWGSGPAFG LDANGVLAWH YYGGGKELLD EIYKSLNLDV VSKLYGPMPT QPLGWFKKPV ARVEDLKGLK FRTVGLAVDV FTEMGVAVNP LPGGEIVPAL DRGLLDAAEF NNASSDRVLG FPDVAKNCML HSFHQSSEQF EVLFNKSKYD ALSSELKAVI DYAVQAASAD MSWKAADRYA KDYAEMQSKQ GVKFYKTPDA ILRAQLAAWD KVTAKKAEEN AMFKKVMDSM RTFAQRSGRW KNDTDVDFKM AWNHYFAQRK S
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