| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2478 |
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| Symbol | |
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| ID | 7383980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 2633060 |
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| End bp | 2635021 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643655786 |
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| Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
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| Protein accession | YP_002553914 |
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| Protein GI | 222111650 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.304638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATGC GCAAGGAACT GTGGTTCGGC TTTGCCATCA TGGCGCTGGT GGTGGCCGGC
GCCGTCGGGA TGCTGCTGGG CGTGGAGACG ATCATGCGCG GCCACCTGGG CTTGCTGATG
CTGTCGCTGG TGGTGGTGGC CATCATGCTG GGTTTTCCCA CCGCGTTCAC GCTCATGGGC
ATGGGCATGA TCTTCACCTG GCTGGCGTAC GACAGCGACA TCACGCGCAC GCTGGACCTG
ATGGTGCAGG CGGCTTACAA GAGCATGGCC AACGACGTGC TCATCGCCAT TCCGTTGTTC
GTGTTCATGG GCTACCTGGT CGAGCGGGCC AACCTGATCG AAAAGCTTTT CAAGAGCCTG
CATCTGGCCA TGGCGCGCGT GCCGGGTTCG CTGGCCGTGG CCACGTTGAT CACCTGCGCC
ATCTTCGCCA CCGCCACGGG CATCGTGGGC GCGGTGGTCA CGCTGATGGG CCTGCTGGCG
CTGCCGGCCA TGCTGCGCGC GGGCTATAGC ACGCCCATGT CGGCCGGCGC GATCACGGCG
GGTGGCTGCC TGGGCATCCT GATTCCGCCG TCGGTGCTGC TGATCCTGTA TGGCGCGACG
GCGGGCGTAT CGGTGGTGCA GTTGTACGCG GGCGCCTTCT TCCCCGGCAT CATGCTGGCG
GGCCTGTATG TGATGTACGT GATTCTGATG GCCAAGCTCA AGCCGGCCTG GGCGCCGCCG
CTGTCGGCCG AGGAACGGCA GGTGGTGCTG CCGGCCATGA CCGCCGCGCT GCCCGCCGAG
ACGCAGCAAT ATGCCCCCGT GCGCTTGCTG GATGCCCTCA AGGGCAAGCG CAATGCGCAG
GTACCCACGG CCTATGTGCT GCGGCAACTG GCACTGGTGG TGATGCCGGG GCTGCTGTTC
GTACTGCTGG CCACCAGCAG CTGGCGTGCG GTCACCACGG TGTCGGTGGA GGAGGCGTAC
GGCATCCAAC CCATCGGCTT CAACGACAAC TCGCCCCGGG TGGCGTCGGA GTTTGGCTTG
CAGGAGCCGC CGGTGGAGGG CGGCCTGCAA GAACCGCCGC AGGAATCCAC GGGCCTGCAG
GAGCCTCCGG GCGCGGACAG TGGTGCGCTG GCCGAACCCC CCGGCGCCGA GCCCGCGCAG
TCCGCCCCAT CCGCAGTGGG AGAGCCGCCC GGCTCCACCG CAGGTGCCAC GCCCCAGGCC
GCCACGCAAC CCGCGCCCAC CTGGTGGTGG GTCATGTTTG GCGTGCTGGG TGCGGCCACA
GCGCTCTTCT ATCTGTTCCT GAGCTTCGCG CGGCTGGAAA TCTTCAAGAT GCTGCTGGGC
TCGTTCTTCC CGCTGCTGAC ACTGATCATG GCCGTGCTGG GCTCCATCGT GTTCGGTCTG
GCGACGCCGA CCGAGGCGGC GGCCATGGGG GCGTTCGGCG GCTTCGTGCT GGCCGCGGCC
TACAAGCGTC TGAGCATGGA TGTGGTGCGC GAGTCGGTGT ACCTCACGGC CAAGACCTCG
GCCATGGTGT GCTGGCTGTT CGTGGGCTCG GCCATCTTCT CCGCGGCCTT CGCGCTGCTG
GGGGGGCAGG AGCTCATCGA GCAGTGGGTG CTCTCCATGA ACCTGAGCAA GATCGAGTTC
ATGGTGCTGT CGCAGGTGGT GATCTTCCTG CTGGGCTGGC CGCTGGAGTG GACGGAGATC
ATCGTGATCT TCATGCCCAT CTTCATCCCG CTGCTGAGCC ACTTCGGCGT GGACCCGCTG
TTCTTCGGCC TGCTGGTGGC GCTGAACCTG CAGACGGCCT TCCTGTCGCC GCCCGTGGCC
ATGTCGGCGT TCTACCTGAA GGGCGTGGCG CCGCCGCATG TGAGGCTCAA CCAGATCTTC
CTGGGCATGC TGCCGTTCAT GGGCATCCAG GTGCTGGCGA TCGTGCTGCT GTATGTGTGG
CCGCAGATCG GTCTGTGGCT GCCGCAACTG CTCTACAAGT GA
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| Protein sequence | MKMRKELWFG FAIMALVVAG AVGMLLGVET IMRGHLGLLM LSLVVVAIML GFPTAFTLMG
MGMIFTWLAY DSDITRTLDL MVQAAYKSMA NDVLIAIPLF VFMGYLVERA NLIEKLFKSL
HLAMARVPGS LAVATLITCA IFATATGIVG AVVTLMGLLA LPAMLRAGYS TPMSAGAITA
GGCLGILIPP SVLLILYGAT AGVSVVQLYA GAFFPGIMLA GLYVMYVILM AKLKPAWAPP
LSAEERQVVL PAMTAALPAE TQQYAPVRLL DALKGKRNAQ VPTAYVLRQL ALVVMPGLLF
VLLATSSWRA VTTVSVEEAY GIQPIGFNDN SPRVASEFGL QEPPVEGGLQ EPPQESTGLQ
EPPGADSGAL AEPPGAEPAQ SAPSAVGEPP GSTAGATPQA ATQPAPTWWW VMFGVLGAAT
ALFYLFLSFA RLEIFKMLLG SFFPLLTLIM AVLGSIVFGL ATPTEAAAMG AFGGFVLAAA
YKRLSMDVVR ESVYLTAKTS AMVCWLFVGS AIFSAAFALL GGQELIEQWV LSMNLSKIEF
MVLSQVVIFL LGWPLEWTEI IVIFMPIFIP LLSHFGVDPL FFGLLVALNL QTAFLSPPVA
MSAFYLKGVA PPHVRLNQIF LGMLPFMGIQ VLAIVLLYVW PQIGLWLPQL LYK
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