| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2467 |
|---|
| Symbol | |
|---|
| ID | 7383969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2623347 |
|---|
| End bp | 2624060 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643655775 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002553903 |
|---|
| Protein GI | 222111639 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.766044 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGCA CCCCCGCACT GGAAATCCGC AATCTCGAAG CCTGGTACGG CGAGTCGCAC
GTGCTGCACG GCGTGGACAT GGTCGTGCAG CCCGGCGAGG TGGTCACGCT GCTGGGACGC
AACGGCGCGG GCCGCACCTC CACCATGCGC GCCATCATGG GCCTGACCGG CGCACGCAAG
GGCTCGGTGA AGATCCACGG CGTGGAGACC ATCCACCTGC CCACACACCG CATCGCGCAC
CTGGGCCTGG GCTACTGCCC CGAAGAGCGC GGCATCTTCT CCAGCCTGTC GTGCGAGGAG
AACCTGATGC TGCCGCCCGT GCTCAAGACG GGCTCGCAGG GCATGTCGAT CGACGAGATC
TACGCCATGT TCCCCAACCT GGCCGAGCGC AAGAACAGCC AGGGCACGCG CCTGTCGGGC
GGTGAGCAGC AGATGCTGGC CGTGGCCCGC ATCCTGCGCA CCGGCGCCAA GCTGCTGCTG
CTGGACGAAA TTTCCGAAGG CCTGGCGCCC GTGATCGTGC AGGCGCTGGC ACGCATGATC
ATCACGCTGC GCGAGAAGGG CTACACGGTG GTGATGGTGG AGCAGAACTT CCGCTTCGCC
GCGCCGCTGG CCGACCGCTT CTACGTCATG GAGCACGGCC AGATCGCCCT GCAGTTCGGC
GCCGACGAGC TGGCGGCCAA GATGCCCGTG CTCAACCAGT TGCTGGGCGT CTGA
|
|---|
| Protein sequence | MAGTPALEIR NLEAWYGESH VLHGVDMVVQ PGEVVTLLGR NGAGRTSTMR AIMGLTGARK
GSVKIHGVET IHLPTHRIAH LGLGYCPEER GIFSSLSCEE NLMLPPVLKT GSQGMSIDEI
YAMFPNLAER KNSQGTRLSG GEQQMLAVAR ILRTGAKLLL LDEISEGLAP VIVQALARMI
ITLREKGYTV VMVEQNFRFA APLADRFYVM EHGQIALQFG ADELAAKMPV LNQLLGV
|
|---|
| |