Gene Dtpsy_2466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_2466 
Symbol 
ID7383968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp2622100 
End bp2623302 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content63% 
IMG OID643655774 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_002553902 
Protein GI222111638 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.469696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAGA CACTCAAGAC ACTGGTCGCA GTGATGGGGG CCGCCGGCCT GGCGGTATCC 
GCCATGCAGG CCCATGCACA GGACAAGGTG AAGATCGGCT TCATCACCGA CATGTCCAGC
CTCTACGCCG ACGTGGAAGG CAAAAACGGT GCTCTGGCCA TCCAGATGGC CATCGACGAC
TTCGGCGGCA AGGTGCTGGG CAAGCCCATC GAACTGCTCT CCGCCGACCA CCAGAACAAG
GCCGACATCG CTGCCAGCAA GGCGCGCGAG TGGATCGACA CGCAGAACCT GACGATGCTG
TTCGGTGGCA CCAACTCCGG CACCGCCCTG GCCATGGCCA AGGTGGCCGA AGAGAAGAAG
CGCGTGTACT TCAACAGCGG CGCCGGTTCC TCCGCGCTGA CCAACGACCA GTGCACGCCC
TACACCGTGC ACTACGCCTA CGACACCGTG GCCCTGGCCA AGGGCACGGG CGGCGCCGTG
GTGAAGCAGG GCGGCAAGGA CTGGTTCTTC CTGACGGCCG ACTACGCCTT CGGCCAGGCG
CTGGAGAACG ACACCGCCAA GGTGGTCAAG GAAAACGGCG GCCGCGTGGT AGGCAACGTG
AAGCACCCGC TGAACGCGTC CGACTTCTCC TCCTTCCTGC TGCAGGCACA AAACTCCAAG
GCGCAGATCC TGGGCCTGGC CAACGCCGGC GGCGACACCA TCAACGCCAT CAAGGCGGCC
AAGGAATTCG GCATCAACAA GAACATGAAG CTGGCCGGCC TGCTGGTGTT CCTGACCGAC
ATCCACAGCC TGGGCCTGCG CAACACCGAA GGCCTGCTGC TGACCACCAG CTGGGACTGG
AACCTGAACG ATAAGACGCG CGAGTTCGGC AAGAAGTTCT TCGCCAAGAC CAAGCGCATG
CCCACGGACA TCCACGCGGC CGACTACTCC GCCACCATGA ACTACCTGAA GGCCGTGCAG
GCCGCCGGCA CCACCGATGC CGACAAGGTC ATGGAGAAGC TCAAGTCCAC GCCGATCGAC
GACTTCTACG CCAAGGGCAC GATCCGCGCC GACGGTCGCT TCGTGCACGA CATGTACCTC
ATGCAGGTGA AGTCGCCCTC CGAATCCAAG GAACCCTGGG ACTACTACAA GGTCGTGGCC
AAGCTGCCCG GCGACCAGGT GTTCACCACC AAGGCCGAGA GCAAGTGCGC CCTGTGGAAG
TGA
 
Protein sequence
MQKTLKTLVA VMGAAGLAVS AMQAHAQDKV KIGFITDMSS LYADVEGKNG ALAIQMAIDD 
FGGKVLGKPI ELLSADHQNK ADIAASKARE WIDTQNLTML FGGTNSGTAL AMAKVAEEKK
RVYFNSGAGS SALTNDQCTP YTVHYAYDTV ALAKGTGGAV VKQGGKDWFF LTADYAFGQA
LENDTAKVVK ENGGRVVGNV KHPLNASDFS SFLLQAQNSK AQILGLANAG GDTINAIKAA
KEFGINKNMK LAGLLVFLTD IHSLGLRNTE GLLLTTSWDW NLNDKTREFG KKFFAKTKRM
PTDIHAADYS ATMNYLKAVQ AAGTTDADKV MEKLKSTPID DFYAKGTIRA DGRFVHDMYL
MQVKSPSESK EPWDYYKVVA KLPGDQVFTT KAESKCALWK