Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2466 |
Symbol | |
ID | 7383968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 2622100 |
End bp | 2623302 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643655774 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_002553902 |
Protein GI | 222111638 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.469696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAGA CACTCAAGAC ACTGGTCGCA GTGATGGGGG CCGCCGGCCT GGCGGTATCC GCCATGCAGG CCCATGCACA GGACAAGGTG AAGATCGGCT TCATCACCGA CATGTCCAGC CTCTACGCCG ACGTGGAAGG CAAAAACGGT GCTCTGGCCA TCCAGATGGC CATCGACGAC TTCGGCGGCA AGGTGCTGGG CAAGCCCATC GAACTGCTCT CCGCCGACCA CCAGAACAAG GCCGACATCG CTGCCAGCAA GGCGCGCGAG TGGATCGACA CGCAGAACCT GACGATGCTG TTCGGTGGCA CCAACTCCGG CACCGCCCTG GCCATGGCCA AGGTGGCCGA AGAGAAGAAG CGCGTGTACT TCAACAGCGG CGCCGGTTCC TCCGCGCTGA CCAACGACCA GTGCACGCCC TACACCGTGC ACTACGCCTA CGACACCGTG GCCCTGGCCA AGGGCACGGG CGGCGCCGTG GTGAAGCAGG GCGGCAAGGA CTGGTTCTTC CTGACGGCCG ACTACGCCTT CGGCCAGGCG CTGGAGAACG ACACCGCCAA GGTGGTCAAG GAAAACGGCG GCCGCGTGGT AGGCAACGTG AAGCACCCGC TGAACGCGTC CGACTTCTCC TCCTTCCTGC TGCAGGCACA AAACTCCAAG GCGCAGATCC TGGGCCTGGC CAACGCCGGC GGCGACACCA TCAACGCCAT CAAGGCGGCC AAGGAATTCG GCATCAACAA GAACATGAAG CTGGCCGGCC TGCTGGTGTT CCTGACCGAC ATCCACAGCC TGGGCCTGCG CAACACCGAA GGCCTGCTGC TGACCACCAG CTGGGACTGG AACCTGAACG ATAAGACGCG CGAGTTCGGC AAGAAGTTCT TCGCCAAGAC CAAGCGCATG CCCACGGACA TCCACGCGGC CGACTACTCC GCCACCATGA ACTACCTGAA GGCCGTGCAG GCCGCCGGCA CCACCGATGC CGACAAGGTC ATGGAGAAGC TCAAGTCCAC GCCGATCGAC GACTTCTACG CCAAGGGCAC GATCCGCGCC GACGGTCGCT TCGTGCACGA CATGTACCTC ATGCAGGTGA AGTCGCCCTC CGAATCCAAG GAACCCTGGG ACTACTACAA GGTCGTGGCC AAGCTGCCCG GCGACCAGGT GTTCACCACC AAGGCCGAGA GCAAGTGCGC CCTGTGGAAG TGA
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Protein sequence | MQKTLKTLVA VMGAAGLAVS AMQAHAQDKV KIGFITDMSS LYADVEGKNG ALAIQMAIDD FGGKVLGKPI ELLSADHQNK ADIAASKARE WIDTQNLTML FGGTNSGTAL AMAKVAEEKK RVYFNSGAGS SALTNDQCTP YTVHYAYDTV ALAKGTGGAV VKQGGKDWFF LTADYAFGQA LENDTAKVVK ENGGRVVGNV KHPLNASDFS SFLLQAQNSK AQILGLANAG GDTINAIKAA KEFGINKNMK LAGLLVFLTD IHSLGLRNTE GLLLTTSWDW NLNDKTREFG KKFFAKTKRM PTDIHAADYS ATMNYLKAVQ AAGTTDADKV MEKLKSTPID DFYAKGTIRA DGRFVHDMYL MQVKSPSESK EPWDYYKVVA KLPGDQVFTT KAESKCALWK
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