| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2462 |
|---|
| Symbol | |
|---|
| ID | 7383964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 2617522 |
|---|
| End bp | 2618664 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643655770 |
|---|
| Product | secreted hydrolase-like protein |
|---|
| Protein accession | YP_002553898 |
|---|
| Protein GI | 222111634 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5621] Predicted secreted hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.249104 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGGGC GCCGCGCGGT GCTGGCATTC GCGGCCCAGG GCGCGCTGGG TAGTGCTGCC
TGCGGCTGGG CTGCTCCCGC CTGGGCCCTG GCGCCGCGCA CGCTGGCCTT CCCGCGCGAC
CACGGCAGTC ACCCCGATCT GCGCACCGAG TGGTGGTACA TCACCGGCCA TGCGCAGGCC
GACGAGCGGC AGTGGGGCTT TCAGATCACC TTTTTTCGCA CGCGCGTGGA GGCCACGCAG
GGCATGCAGT CGGCCTTCGC CGCGCGCCAG CTCGTGTTTG CGCACGCGGC GCTGACCGAC
GTGCAAGGCC GTCGCCAATT GCACGACCAG CGCATTGCCC GCGCGGGCTT CGGCATTGCC
GAGGCGCTGG AGGGCGACAC GCAGGTGCGC CTGCGCGACT GGTCGCTCAC GCGCCATGCC
AGCAGCGCGC CGGGCGGCAG CCGCTACGAG GTGCGCGCGC AGGCAGAAGG ATTTGCGCTG
GAGCTGGACT GCGCCAGCAC CCAGCCCGTG CTGCTGCAGG GCCAGGCCGG CCTGTCGCGC
AAAGGGCCCC ACGCGGCGCA GGCCAGCTAC TACTACAGCC AGCCCCAGTT GGCCGTGACG
GGCGCTATCA CCCTCGCGGG CCGGCGCATG CCGGTGCAAC CACTGGCCGC GCCCGCCAAC
CGCGCCTGGA TGGACCATGA GTGGAGCGAG GCGCTGATGC ACCCCGAGGC CGTGGGCTGG
GACTGGATCG GCATGAACCT GCACGACGGC GCCGCACTCA CCGCGTTCCG CCTGCGGCGC
GCCGACGGCA GCACGCTCTG GACCGGGGGT TCCTGGCGGC CCGCAGGAGC GGACGCCGCG
CAGGTGTTCG CGTCCGAGGC CGTGGTGTTC TCCCCGCTGC GCCACTGGCA CAGCCCGGCC
AGCGGCGCGC GCTACCCGGT GCAGTGGCGC GTGGACACGC CCGCGGGCGG CTTCATCGTG
CGTGCGCTGC TGGACGCGCA GGAGCTGGAC AGCCGCGGCT CCACCGGCGC GATCTACTGG
GAAGGACTGT GCACGCTGCA TGCATCGCGG GCGCGGGGCG ATGCGGGCGA ACCGGCCGGC
CCCGAGGTGG GGCGCGGCTA TCTGGAAATG ACGGGCTATG CGCAGCGCCT GCGGCTGGGC
TGA
|
|---|
| Protein sequence | MVGRRAVLAF AAQGALGSAA CGWAAPAWAL APRTLAFPRD HGSHPDLRTE WWYITGHAQA
DERQWGFQIT FFRTRVEATQ GMQSAFAARQ LVFAHAALTD VQGRRQLHDQ RIARAGFGIA
EALEGDTQVR LRDWSLTRHA SSAPGGSRYE VRAQAEGFAL ELDCASTQPV LLQGQAGLSR
KGPHAAQASY YYSQPQLAVT GAITLAGRRM PVQPLAAPAN RAWMDHEWSE ALMHPEAVGW
DWIGMNLHDG AALTAFRLRR ADGSTLWTGG SWRPAGADAA QVFASEAVVF SPLRHWHSPA
SGARYPVQWR VDTPAGGFIV RALLDAQELD SRGSTGAIYW EGLCTLHASR ARGDAGEPAG
PEVGRGYLEM TGYAQRLRLG
|
|---|
| |