| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2456 |
|---|
| Symbol | |
|---|
| ID | 7383958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 2610334 |
|---|
| End bp | 2611590 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643655764 |
|---|
| Product | drug resistance transporter, Bcr/CflA subfamily |
|---|
| Protein accession | YP_002553892 |
|---|
| Protein GI | 222111628 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.202004 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTCC CGTCCGCCGC CATCGGCCCG CAGCAGGCGC CTCCGGTACC CGTGCCTGTG
CCTCCCGGCC TGGCCATCCT GGTGCTGGCC CTGCTGCTGA GCATCCAGCC CGTCACCACC
GATCTGTACC TGCCCGCCCT GCCCGCGCTC ACGCGCAGCC TGAACGCACC CGTGGCCGCA
GGCCAACTCA CGCTGTCCGC GCTGCTGCTG GCCTTTGGCT GCTCGCAACT GGCATGGGGG
CCGCTGTCCG ACCGATTCGG CCGCCGGCCG GTGCTGCTCA CCGGGCTGGC GATGTACACG
CTGGCGGCGG TGGGCGCGGC GCTGGCGCCG TCGATGGCGG TGCTCATCGC CTGGCGCACG
GCCCAGGGCG TCGCCATGGG CGCCGTGGTG ATGTGCGCGC GCGCCATCGT GCGCGACCTG
TACACGCCGC TGGCGGGCGC ACGCGCCATG TCCAAGGCGC TGACCGGCTT GGGGTTCGTG
GCCTGCCTGT GCGCGCCGCT GGGCGGGCTG CTGACCGAAT GGTTCAACTG GCGCGCGGCA
CTGCTGGCGC TCACCGGCTA CGCCATGGGC ACGCTGGCGC TGGTGGCGCT GCGCATGCCC
GAGACGCTGC ACCAGCGCAA CCCGCACGCC CTGCGCCCCG CCATGCTGGC AGGCACCGCG
GCGCAGATAT TGGGCACGCC CGCGTTCTGG GCGTTCTCGC TGCTCACCAC GGCCAGCTAT
GGCGGGCTGT TCACCTTCCT GGCTGCTTCG TCCTTCGTCT ACCTCGACGT GCTGGGCATT
TCGCGCACGC AGTACGGGCT GGCGCTGCTG TCCACGGCCG TGGCGTACCT GCTGGGCACG
CTGCTGTGCC GGCGGCTGCT GGCGCGCCAG GGCCTCAAGC GCACGGTCGC CATCGCCGGC
GCGCTGTCGG CCAGCGGCGG CCTGCTGATG CTGCTGGCCG CCGCGCTGGG CTGGCACAGC
GTGGCCGCGC TGCTGCCGCC GTTCTACCTC TACATGGTGG GCCACGGCAT CCACCAGCCC
TGCGGGCAGT CGGGCGCGGT GGGACCGTTC CCGCAGGCGG CGGGCATGGC CTCGGCGCTC
AATGGTTTCA TGATGATGCT GGCGGGCTTC GCCATCGGCC AGTGGCTGGG CGGGGCGCTG
GACGGCAGCG TGTGGCCGCT GGTGCAAGGC GTGGCCCTGT GGTCGCTGCT GCTGGCCGCC
ATTGCCTGGA CGCTGGTGCA GCGCCATGCC CCGCAGGAGG TTGCCCATGC CCGCTGA
|
|---|
| Protein sequence | MSVPSAAIGP QQAPPVPVPV PPGLAILVLA LLLSIQPVTT DLYLPALPAL TRSLNAPVAA
GQLTLSALLL AFGCSQLAWG PLSDRFGRRP VLLTGLAMYT LAAVGAALAP SMAVLIAWRT
AQGVAMGAVV MCARAIVRDL YTPLAGARAM SKALTGLGFV ACLCAPLGGL LTEWFNWRAA
LLALTGYAMG TLALVALRMP ETLHQRNPHA LRPAMLAGTA AQILGTPAFW AFSLLTTASY
GGLFTFLAAS SFVYLDVLGI SRTQYGLALL STAVAYLLGT LLCRRLLARQ GLKRTVAIAG
ALSASGGLLM LLAAALGWHS VAALLPPFYL YMVGHGIHQP CGQSGAVGPF PQAAGMASAL
NGFMMMLAGF AIGQWLGGAL DGSVWPLVQG VALWSLLLAA IAWTLVQRHA PQEVAHAR
|
|---|
| |