| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2455 |
|---|
| Symbol | |
|---|
| ID | 7383957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2609200 |
|---|
| End bp | 2610189 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643655763 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
|---|
| Protein accession | YP_002553891 |
|---|
| Protein GI | 222111627 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA TAGTCCACTG CGCGCATTCA GCTTCGAGCA ACGCCGTGAC CTCCACCACC
CGCATTCCCT TGCTTATCCT CAACGGCATG ACGCCGCAGC ACCTGGACCA GATCGGCCAG
CGTTTTGACG TCTGCTATGC CCCCACGCCC GACGCGCGCG CCCAGGCCAT CACACAGCAG
GGCGCGCGCT TCAGGGCGGT GCTGACCATC GGCGCCGTCG GTCTCACGGC GCAGGAGATC
GCCGCCATGC CCGCGCTGGA GCTGGTGTGT GCCCTGGGCG CGGGCTACGA GAACGTGGCG
CTGGACGCCG CCCGCGCGCG CGGCATTGCG CTGGCCAACG GCGCGGGCAC CAACGACGAC
TGCGTGGCCG ACCATGCGTT CGGGCTGCTG ATTGCCATCG TGCGCGGCAT GCGCACCCTG
GACCAGCAGT GCCGCGCGGG CGTGTGGCGC GATGCGATCG GCCTGCCGCC CAATGTCTCG
CGCAAGCGGC TGGGCATCTT TGGGCTGGGC ACCATCGGCC ACAAGATCGC GCGCCGGGCG
GCAGGCTTTG ACATGGAGAT CGGCTACCAC AACCGCAGCC CGCGCGCGGA GGTGCCGCAC
CGCTACTTCC CCAGCCTGCA GGAGCTGGCC GCCTGGTGCG ACGTGCTGGT GTGCGCCACG
CCGGGCGGGG CGTCCACGCG CCACCGCGTC AATGCCGAGG TGCTGCAGGC GCTGGGCCCG
CAGGGCTACC TGGTGAACAT CGCGCGCGGC AGCGTGGTGG ACACGCAGGC CCTGGCGGCT
GCGCTGCGCG AGCGCCGCAT TGCCGGTGCG GGGCTGGATG TGTACGAGAG TGAGCCCGCG
CCGCCGCAGG AGCTGGTGGG CCTGGACAAC GTGCTGCTCA CCCCGCACGT GGCCGGCTGG
TCGCCCGAGG CCGTGCAGGC CAGCGTGGAC CGCTTCCTGG CCAACGCCGA GGGCCACTTT
GCGGGCCGCG GCGTGGTCTC GCCGATCTGA
|
|---|
| Protein sequence | MKNIVHCAHS ASSNAVTSTT RIPLLILNGM TPQHLDQIGQ RFDVCYAPTP DARAQAITQQ
GARFRAVLTI GAVGLTAQEI AAMPALELVC ALGAGYENVA LDAARARGIA LANGAGTNDD
CVADHAFGLL IAIVRGMRTL DQQCRAGVWR DAIGLPPNVS RKRLGIFGLG TIGHKIARRA
AGFDMEIGYH NRSPRAEVPH RYFPSLQELA AWCDVLVCAT PGGASTRHRV NAEVLQALGP
QGYLVNIARG SVVDTQALAA ALRERRIAGA GLDVYESEPA PPQELVGLDN VLLTPHVAGW
SPEAVQASVD RFLANAEGHF AGRGVVSPI
|
|---|
| |