| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2444 |
|---|
| Symbol | |
|---|
| ID | 7383946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2593390 |
|---|
| End bp | 2594538 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643655752 |
|---|
| Product | basic membrane lipoprotein |
|---|
| Protein accession | YP_002553880 |
|---|
| Protein GI | 222111616 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTAC TGAATAAACG ATCCCTTTTA AAGGCTGTGG CCCTGTCGGC TGTGGCCCTC
GCCACGCTGG CGGCCTGCGG CAAGAAGGAA GAGGCGCCTG CCGCCGCACC GGCACCGGCT
GCCGCACCCG CGGCCGACAA GCTGAAGATC GGTTTCATGT ACGTGAGCCC CATCGGCGAT
GGCGGCTGGA CCTACCAGCA TGAGCTGGGA CGTAAGGCCA TCCAGGAGAA GTTCGGGGAC
CGCATCGAGA CCTCGTTCGT GGAAAGCGTG CCCGAGAGCG CCGACGCCGA GCGCGTGATG
CGCGACATGG CAGGCCAGGG CAACAAGCTG ATCTTTGCCA CGAGCTTCGG CTACCAGGAG
TTCGTGCAGA AAGTTGCGGC CGACCTGAAG GACGTGAAGT TCGAGCACGC CACTGGCTAC
AAACAGGCCG ACAACGTCGC CACCTACGAC ACCAAGACCT TCGAAGGCGC GTACCTCGCG
GGCATCGTGG CGGGCGGCAT GAGCAAGACC AAGACCGTGG GGGTGGTGGC CTCGGTGCCG
ATCCCCGAAG TGGTGCGCAA CATCAACAGC TTCGTGCTGG GCGCGCAGAG CGTGGACCCG
TCGATCAAGG CCAAGGTGGT GTGGGTCAAT GAGTGGTTCA GCCCGCCCAA GGAGGCCGAG
GCCGCCGCAT CGCTGCTCAA CGGCGGCGTG GACGTGATGT ACCAGAACAC CAACTCGCCG
GCCGTGCTCA AGGCGGCAGA GGAGCGCGGC GCGCGCGCCT TCGGCAAGGA CGGCGACATG
AGCGCCTATG CGCCCAAGGC GCACCTGGGC TCGGCCGTGA TCGACTGGAC GCCCTACTAC
ACCAAGGTGG TCGAGGACAC GCTGGCCGGC AAGTGGCAGG GCGGCGCGCA CTGGTGGGGT
GTGAAGGAGG GGGCGATCGA CCTCTTGAAG ATTGCTGACG ACGTGCCGCA GGAGATCAAG
GACCGCGTGG CCAAGGCCAA GGCAGGCATG CAGGACGGCA GCTTTGCCGT CTGGACCGGT
CCCATCAAGG ACAACGCTGG CAAGGAAGTG CTGGCCGCCG GCACGGTGGG CGATCTGAAG
TTCCTCTCCG GCATCAATTT CTACGTGGCC GGCGTGGAGG GCAAGGTGCC CGGCACCGAC
GGCAAGTGA
|
|---|
| Protein sequence | MNVLNKRSLL KAVALSAVAL ATLAACGKKE EAPAAAPAPA AAPAADKLKI GFMYVSPIGD
GGWTYQHELG RKAIQEKFGD RIETSFVESV PESADAERVM RDMAGQGNKL IFATSFGYQE
FVQKVAADLK DVKFEHATGY KQADNVATYD TKTFEGAYLA GIVAGGMSKT KTVGVVASVP
IPEVVRNINS FVLGAQSVDP SIKAKVVWVN EWFSPPKEAE AAASLLNGGV DVMYQNTNSP
AVLKAAEERG ARAFGKDGDM SAYAPKAHLG SAVIDWTPYY TKVVEDTLAG KWQGGAHWWG
VKEGAIDLLK IADDVPQEIK DRVAKAKAGM QDGSFAVWTG PIKDNAGKEV LAAGTVGDLK
FLSGINFYVA GVEGKVPGTD GK
|
|---|
| |