Gene Dtpsy_2408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_2408 
Symbol 
ID7383910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp2558864 
End bp2560120 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content70% 
IMG OID643655717 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_002553845 
Protein GI222111581 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCTT CCACCCCCCG CGGCGCCTTG GACGGTATCA AGGTACTGGA TCTTTCGCGC 
GTGCTTGCCG GTCCCTGGTG CACCCAGATG CTGGCCGATC TGGGCGCCGA CGTGGTCAAG
GTCGAGCGCC CCCAGGCCGG TGACGACACG CGCCACTGGG GCCCGCCCTT CCTGAAGGAC
GACGCTGGCC GCGACACGCG CGAGGCCAGC TACTTCACCG CCTGCAACCG CAACAAGCGC
AGCATCACCG TGGACATGGC CCATCCCGAG GGCCAGGCGC TGCTGCGCCG CATGGCCGCC
GAGGCCGACG TGGTGGTCGA GAATTTCAAG GTCGGCGGTC TGGCGCAATA CGGGCTGGAC
TACGCCAGCC TGAAAGCGCT GAACCCGCGC CTGGTCTACT GCTCCATCAC CGGCTTCGGC
CAGGACGGGC CGTATGCCGA ACGCGCCGGC TATGACCTGA TGGTGCAGGC CATGTGCGGC
CTGATGAGCA TCACCGGCCA TGCCGACGGG CAGCCCGGCG GCGGGCCTCT AAAGGTCGGC
GTGGCCGTGG TGGACGTGTT CACCGGCCTG TACGCCAGCA ACGCCATCCT GGCCGCGCTG
AACGCGCGCG ACAACGCCCG CAACGGCACC GGCGAAGGGC AGCACATCGA CATGGCTTTG
CTCGACGTGG GCATGGCCGT GCTGGCCAAC CAGGCGGCGG GCTACCTGGC CACCGGGCAG
GCGCCCGGAC GCGCCGGCAA CATCCACCCC AGCCTGGCGC CCTACCAGGA CTTTCGCAGC
CGCGACGGCA ACGTGCTGCT GGCGATCGGC AACGACGGAC AGTTCGCGCG CTTTTGCCAG
GCGTGCGGCC ACCCCGAATG GGCACAGGAC GCACGCTTTG CCACCAATAC CGCACGCGTG
CAGCACCGCG CTGCGCTGCT GGCGCTGATG GAGCCCGTCC TGCAGACCCG CAGCACCGCC
GAGTGGATCG CCCTGCTGGA GGACAAGGCC GTGCCCTGCG GCCCCATCAA CACCATCGCC
CAGGCCTTCG ACGACCCACA GGTGCGCGCG CGCGGCATCC GCAGGGAGCT GCCCCGCGAC
GCCGGCGACG GCATCGCCCA CGTGGCCACG GTGGCCAACC CCATGCGGCT GTCGGGCACG
CCCGTCAGCT ACCATCGCGC GCCACCCGCG CTCGGCCAGC ACACCGACGA GGTGCTGCGC
GAGCTGGGCC TGGATGCTTC GGCCATCGCA GCGCTCAAAG CGGGGGGTGC CATCTGA
 
Protein sequence
MSASTPRGAL DGIKVLDLSR VLAGPWCTQM LADLGADVVK VERPQAGDDT RHWGPPFLKD 
DAGRDTREAS YFTACNRNKR SITVDMAHPE GQALLRRMAA EADVVVENFK VGGLAQYGLD
YASLKALNPR LVYCSITGFG QDGPYAERAG YDLMVQAMCG LMSITGHADG QPGGGPLKVG
VAVVDVFTGL YASNAILAAL NARDNARNGT GEGQHIDMAL LDVGMAVLAN QAAGYLATGQ
APGRAGNIHP SLAPYQDFRS RDGNVLLAIG NDGQFARFCQ ACGHPEWAQD ARFATNTARV
QHRAALLALM EPVLQTRSTA EWIALLEDKA VPCGPINTIA QAFDDPQVRA RGIRRELPRD
AGDGIAHVAT VANPMRLSGT PVSYHRAPPA LGQHTDEVLR ELGLDASAIA ALKAGGAI