| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2406 |
|---|
| Symbol | |
|---|
| ID | 7383908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2556396 |
|---|
| End bp | 2557349 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643655715 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002553843 |
|---|
| Protein GI | 222111579 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGAC ACCTGCCATC CACCCAGGCG CTGGCCTGCT TTGAAGCTGC TGCGCGCCAC
GAGAGCTATA CCCGCGCCGC GCAGGAGCTG GCGCTGACGC AAAGCGCGGT GTCGCGCCAA
ATCCTGGCGC TGGAGGAGCA ACTGGGCGTG CAACTCTTTC GCCGCACGCG CCACGGGGTG
GTGCTCACCC CCGCGGGGCG GCATTACGGG CAGCAGGTGG CGCGCTGGCT GCAGGGGCTG
GAGCGCGACA CGCTCGACGT CATGGCCCAC CAGGGGCATG GCGGCGCCAT TTCGCTCGCG
GCCGTGGCCA CCTTTGCCAC GCGCTGGCTG ATTCCGCGCC TGCCTCTGCT GGCCGCGCGC
CACCCCGAGA TCGTGGTGCA CATCGAGACG CAGACCCGGC CCTTCCTGTT CACCGATACG
GCCTTCGACG CGGCGCTGTA CGCGGGCACG CCCGAGCAGG TCGCCAACTG GCCCGGCGTG
CAGGCGCAGC TGCTGATGCA GGAAGACGTG GTGCCCGTGT GCAGCCCGCG CCTGCTGGAG
ACGGCGGCGC AGCAATTGGG CATGCCGCGC GGCACGGGCC GTGCACACCA GGGCCTGCCG
CCACCGGCGC TGGCGCGGCT GCCGCTACTG CAGCAAAGCA CCCGGCCCTA TGGCTGGCGA
CAGTGGTTCG ATGCCATGGG AGTGTCGGAT GCGCCGCGCG CGCTGGAAGG GCCGCGTTAT
GAGTTGTTCT CCATGACGGC TGCCGCGGCG GCCTACGGCC TGGGGATTGC GCTGATGCCG
CCCATGCTGA TCGAGGCCGA GATCGCGCGG GGCGAGCTGG TGGTGGCCTG CCCGCGTCCG
TTGCGTGGCG AGCGGGGTTA CTACCTCGTG AGCCCCGCGC AGCCCCAGCC GCCGGTGCTG
GCCGCGTTCG CTGGCTGGCT GCAGGACATG GCGGTGGCCG GGCCGCTGGC GTAG
|
|---|
| Protein sequence | MRRHLPSTQA LACFEAAARH ESYTRAAQEL ALTQSAVSRQ ILALEEQLGV QLFRRTRHGV
VLTPAGRHYG QQVARWLQGL ERDTLDVMAH QGHGGAISLA AVATFATRWL IPRLPLLAAR
HPEIVVHIET QTRPFLFTDT AFDAALYAGT PEQVANWPGV QAQLLMQEDV VPVCSPRLLE
TAAQQLGMPR GTGRAHQGLP PPALARLPLL QQSTRPYGWR QWFDAMGVSD APRALEGPRY
ELFSMTAAAA AYGLGIALMP PMLIEAEIAR GELVVACPRP LRGERGYYLV SPAQPQPPVL
AAFAGWLQDM AVAGPLA
|
|---|
| |