Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2359 |
Symbol | |
ID | 7383219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 2509006 |
End bp | 2510226 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643655667 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_002553796 |
Protein GI | 222111532 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.433272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCCCA AGTACTACAC CGCTGCCCCC ACGCCCGCGG CACTGGCCGG CGTGCGCGTG ATCGAAATGG GCCAGCTCAT CGCCGGGCCG TTCTGCGGCA AGACATTGGG CGAGTTCGGC GCCGATGTGG TGAAGATCGA GGCCGTGGGC GCGGGCGACC CCCTGCGCAA CTGGCGCCTC ATCAAGGAGG GCACCTCCGT GTGGTGGCAG GTGCAGTCGC GCAACAAGAA GTCGGTGGCG CTGGACCTGC GCCAGGCCGA GGCGCAGGAC ATCGCGCGCC GCCTGATTGC CGAAGCCGAC GTGCTCATCG AGAACTTCCG TCCCGGCACG CTGGAGGGTT GGGGCCTGTC GCCCGAGGCG CTGCACGCCC TCAACCCGGG CCTGGTCATC CTGCGCATCT CGGGCTACGG GCAGACCGGG CCGTACCGCG ACCTGCCGGG CTTTGGCGTG ATCGGCGAGG CCATGGGCGG CCTGCGCCAC CTCACGGCCG AGCCCGGCCG CGTGCCGGTG CGCGTGGGCG TCTCGATCGG TGACACGCTG GCCGCGCTGC ACGGCGCCAT CGGCGTGATG ATGGCGCTGT ACCACCGCAA GGTGAACGGC GGCGCGGGCC AGGTGATCGA CGTGGCCCTG CACGAGGCGG TGTTCAACTG CATGGAAAGC CTGATCCCCG AGTACAGCGC CTTTGGCGCC GTGCGCGAGG CCGCGGGCAG CGCGCTGCCG GGCATTGCGC CGAGCAACGC CTACCCCTGC CAGGACGGCT GGGTGCTGGT GGCCGGCAAC GGCGACAGCA TCTTCAAGCG CCTGATGGCC ACCATCGGCC GCCAGGATCT GGCCGATGAC CCGCAACTGG CCGACAACGC CGGCCGCGTG GCGCGCGTGG CCGAGATCGA CGCCGCCATT GGCCGCTGGA CCGCCGAGCG CACCGTGGCG CAAGTGATGG AGTTGCTGGC CGCCGCACGC GTGCCCGCGG GCAAGGTCTA TACCGCCAAG GACATCGCCG AGGACCCGCA CTACCAGGCG CGAGACATGC TGCTCACGCA GCGCACGCGC GACGGCTACG AGCTGCAGGT GCCGGGCATC GTGCCCAAGC TCTCGGCCAC GCCGGGCACC ATCCGCACCA GCGCGCCGCG CCTGGGGGAC GACACCGATG CCGTGCTGGC CGAGGCGGGG CTGACGGCCG AGCAGATCGC GCTGCTACGC AGCAAGGGAG TGATCCAATG A
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Protein sequence | MTPKYYTAAP TPAALAGVRV IEMGQLIAGP FCGKTLGEFG ADVVKIEAVG AGDPLRNWRL IKEGTSVWWQ VQSRNKKSVA LDLRQAEAQD IARRLIAEAD VLIENFRPGT LEGWGLSPEA LHALNPGLVI LRISGYGQTG PYRDLPGFGV IGEAMGGLRH LTAEPGRVPV RVGVSIGDTL AALHGAIGVM MALYHRKVNG GAGQVIDVAL HEAVFNCMES LIPEYSAFGA VREAAGSALP GIAPSNAYPC QDGWVLVAGN GDSIFKRLMA TIGRQDLADD PQLADNAGRV ARVAEIDAAI GRWTAERTVA QVMELLAAAR VPAGKVYTAK DIAEDPHYQA RDMLLTQRTR DGYELQVPGI VPKLSATPGT IRTSAPRLGD DTDAVLAEAG LTAEQIALLR SKGVIQ
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