| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2349 |
|---|
| Symbol | |
|---|
| ID | 7383209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 2500669 |
|---|
| End bp | 2501763 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643655657 |
|---|
| Product | tartrate dehydrogenase |
|---|
| Protein accession | YP_002553786 |
|---|
| Protein GI | 222111522 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0663819 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAGC AACACACCCA CAAGATCGCC GTGATCGCCG GAGACGGCAT CGGCAAGGAA
GTCATGCCCG AAGGCCTGCG CGCCGTGCAG GCCGCCGCCT GGCGCTTCGG TCTGAACCTG
GAACTGCACA CCTTCGACTG GGCGCATTGC GACTATTACG CCCGGCACGG CCAGATGATG
CCCGACGACT GGAGGGCGCA GCTGTCGGGC ATGGATGCGA TCTTCTTCGG CGCTGTGGGC
TGGCCGGCGA CCGTACCCGA TCACATCTCG CTGTGGGGTT CGCTGCTGAA GTTCCGCCGC
GAGTTCGACC AGTACATCAA CCTGCGCCCC GTGCGTCTGT TCGAGGGCGT GCCCTGCCCG
CTGGCCGGCC GCAAGCCCGG CGATATCGAC TACCTCGTGG TGCGCGAGAA CACCGAGGGT
GAATACACGT CGCTGGGCGG CATCATGTAC GAGGGAACGG ACCGCGAGAT CGTGATCCAA
GAGTCGGTCT ACTCGCGCCA CGGCGCCAAC CGCCTGCTGA AGTTCGCCTT CGACCTGGCG
CAAAGCCGCC CGCGCAAACA CGTGACGCTG GCCACCAAAA GCAACGGCAT CGCCATCAGC
ATGCCCTGGT GGGACCAGCG CGCCGACGAT GTCGCCAAGG GCTACCCCGA AGTCACGCTG
GACAAGCAGC ACATCGACAT CCTCACCGCG CGCTTCGTGC TGCAGCCCGG CCGCTTCGAC
GTGGTGGCCG CCACCAACCT GTTCGGCGAC ATCCTCTCCG ACCTGGGGCC CGCCACCACC
GGCACCATCG GCCTGGCGCC GTCCGCTAAC CTCAACCCCG AACGCACCTT CCCCAGCCTG
TTCGAGCCCG TGCACGGCTC GGCGCCCGAC ATCTATGGCC AGAACATCGC CAACCCGATC
GCCATGATCT GGTCCGGTGC GCTGATGCTG GACTTCCTGA CCCACGGCCA GGGCGCGGGG
CGGCAGGCCC ACGATGCCAT CGTTGCGGCC ATCGAAGAGA TCATCAAAAG CGGCCCGCGC
ACGCCAGACC TGGGCGGTGC GGCAAGCACC ACGCAGGTGG GCGAGGCCAT CGCCGCGCGC
ATCGCGCACG GGTAA
|
|---|
| Protein sequence | MQQQHTHKIA VIAGDGIGKE VMPEGLRAVQ AAAWRFGLNL ELHTFDWAHC DYYARHGQMM
PDDWRAQLSG MDAIFFGAVG WPATVPDHIS LWGSLLKFRR EFDQYINLRP VRLFEGVPCP
LAGRKPGDID YLVVRENTEG EYTSLGGIMY EGTDREIVIQ ESVYSRHGAN RLLKFAFDLA
QSRPRKHVTL ATKSNGIAIS MPWWDQRADD VAKGYPEVTL DKQHIDILTA RFVLQPGRFD
VVAATNLFGD ILSDLGPATT GTIGLAPSAN LNPERTFPSL FEPVHGSAPD IYGQNIANPI
AMIWSGALML DFLTHGQGAG RQAHDAIVAA IEEIIKSGPR TPDLGGAAST TQVGEAIAAR
IAHG
|
|---|
| |