| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2327 |
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| Symbol | |
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| ID | 7383187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 2476826 |
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| End bp | 2478412 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643655635 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002553764 |
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| Protein GI | 222111500 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.356993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGCC CCCATTCCTT CACGCCTCTG ACCGCCGCCC TGGCCTGCGC CCTGCTGGCC
GGCTGCAACC TGGCGCCGCG TTACCAGACG CCGCCGCTGC CCGTGCCGGG CACGATGGCA
TCGCCCCTGC CCCAGCCACA GACCGCCGGC GCCGTGGCGC TGCCGGACGG CGGCCCCATG
GCCTGGCAGG ACTTCGTGCA GGACGCCCGC CTGCGCACGG TGGTGGAACA GGCCCTGGCG
AACAACCGCG ACCTGCGCGT GGCGGTACTG GCCATCGACA AGGCCCGCGC GCAGTACGGC
GTGGTGCAGG CCGACAGTTT TCCCACGGTG AACGCGGCCG GCGCGGGCAA CCGCAGCCGC
ACCGCTGACG ACCTGACCGC CGCGGGCCGC TCCAACACCA CCAGCCAGTA CAGCGCCACA
CTGGGCTTCA GCAGCTACGA GATCGACTTC TTCGGCCGCG TGCGCAACCT GAACGATGCC
GCGCTGCAGG AGTTCCTGCG CGTGGCGGAG AACCGCCGCA GCGTGCAGCT CAGCCTGGTG
GCCGAGGTGA TCGGCGCCTG GCTCACGCTG GACGCCGACG CGCGCCGCCT GCAACTGGCA
CGCGAGACCC TGCGCACGCG CCAGCAGGCC CTGGAGCTCA CGCAGCGCAG CCACGAACTG
GGCGCCAGCT CGGGCCTGGT GCTGGCGCAG GCCCAGTCGG CGGCCGACAC CGCACGCGTG
GATGCGGCCG CCTTCGTCTC GCAGCTGGCG CGCAGCCGCA ACGCCCTGGC CCTGCTGGTG
GGATCGCCCG TGCCCCCAGC GTTGTTGCCC GCCAGCGTGG CCACCGTGGA AACGGCCATG
CCGGTCACGG CCATGGCGGG CCCGGCCACG ACTGCAACCC AGCCCTCTCC CGGCACCGGT
ACTGCGGACA GTCCTGCCCC CCGGTCCTCC GTCCCCGCGC TGGCCGATCC CGCGGCGCCC
GCAACGGCGC TGCTGGCCGT GCCTGCAGAC GTTCCGTCCA GCGTGCTGCT GCGCCGCCCC
GACGTGCGCG CGGCCGAGCA TGCACTGCAG GGCGCCACGG CCAATATCGG CGCGGCCCGC
GCGGCGTTCT TTCCGTCGAT CACGCTCACG GCCTCGGTGG GCACGGCCAG CAATGCGCTG
TCGGGCCTGT TCGAGGGCGG CAACGGCACC TGGGCGTTCG CGCCGCAGAT CCGCCTGCCG
ATCTTCGACG CCGGCCGCAA TCAGGCCAAC CTGCGCGTGG CCGAGGTGAC GCGCGACACC
GCCGTGGCCC AGTACGAGAA GGCCATCCAG ACCGCCTTCC GCGAAGTGTC CGACGCGCTG
GCCGAGCGCG CCACGCTCAC CGAGCGCCTG CAGGCGCAGG GCTCGCTGGT GCAGGCCACA
CAGCGCACGC TGCAGCTGTC GGACGCACGC TTTCGCCTCG GTGCGGACAA CTACCTCGCC
GTGCTGGACG CGCAGCGCAC GCTGTATGCC GCACAGCAGG CGCAGATCAC GCTGCAATTG
GCCGAGCAGG TCAACCGCGT GACGCTCTAC AAGGTGCTAG GCGGCGCCTG GACGGACCCA
ACACCACCGC CGGCAGGCGG CTCCTGA
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| Protein sequence | MTRPHSFTPL TAALACALLA GCNLAPRYQT PPLPVPGTMA SPLPQPQTAG AVALPDGGPM
AWQDFVQDAR LRTVVEQALA NNRDLRVAVL AIDKARAQYG VVQADSFPTV NAAGAGNRSR
TADDLTAAGR SNTTSQYSAT LGFSSYEIDF FGRVRNLNDA ALQEFLRVAE NRRSVQLSLV
AEVIGAWLTL DADARRLQLA RETLRTRQQA LELTQRSHEL GASSGLVLAQ AQSAADTARV
DAAAFVSQLA RSRNALALLV GSPVPPALLP ASVATVETAM PVTAMAGPAT TATQPSPGTG
TADSPAPRSS VPALADPAAP ATALLAVPAD VPSSVLLRRP DVRAAEHALQ GATANIGAAR
AAFFPSITLT ASVGTASNAL SGLFEGGNGT WAFAPQIRLP IFDAGRNQAN LRVAEVTRDT
AVAQYEKAIQ TAFREVSDAL AERATLTERL QAQGSLVQAT QRTLQLSDAR FRLGADNYLA
VLDAQRTLYA AQQAQITLQL AEQVNRVTLY KVLGGAWTDP TPPPAGGS
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