| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2326 |
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| Symbol | |
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| ID | 7383186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 2473662 |
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| End bp | 2476829 |
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| Gene Length | 3168 bp |
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| Protein Length | 1055 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643655634 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002553763 |
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| Protein GI | 222111499 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.155904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCAGT TCTTCATCAA CCGCCCCATC TTCGCGTGGG TGCTGTCCAT CATCATCATG
CTGGCGGGCG GCCTGGCGAT CTTCACGCTG CCGCTGGAGC AGTACCCCGA CATCGCGCCG
CCGCGCGTGA CCATCTCCGC GCAGTACACG GGCGCCTCGG CCGAGACCGT GGAAAACTCG
GTCACGCAGA TCATCGAGCA GCAGCTCAAG GGCATCGACA ACATGATCTA CATGGGCTCG
ACGTCGGATG CGTCGGGCCG ATCGGCCACC ACCCTCACGT TTGCGCCGGG CACCAACATC
GACGTGGCCC AGGTGCAGGT GCAGAACAAG CTGCAGTCGG CCATGAACCG CCTGCCCGAT
GCCGTGAAGA GCCGGGGCGT GTTCGTCAAC AAGGGCGGCC AGGACTACCT GGTCACCTAC
AGCTTCTTCT CGGGCGACCC GAATATGAGC GCGGTGGACA TCGGGGACTA CCTGAACTCC
AACCTCGTGG ACGTGATCGG CCGCCTGGAT GGCGTGGGCG ACATCCGCGT GTTCGGCACC
TTCTACGCCA TGCGCCTGTG GATGGACCCG GCCAAGATGG AGAAATTCCA GCTCATGCCG
TCGGACCTGA TCAGCGCGCT GAACGCGCAG AACGCACAGG TCTCGGCCGG CCAGCTCGGC
GCGCTGCCCG CCGTGCCCGA CCAGCAGCTC AACGCCACCA TCACCGCGCG CACCAAGCTG
CAGACGGTGC AGGAGTTCGA GGACATCGTG CTCAAGACCG CCACCGACGG TTCGGTGGTC
ACGGTGAAGG ACGTCGCGCG CGTGGAACTG GGCCCCGACA ACCTGTCGGT CAAGGCCAAG
CTCAACGGCC GCCCGGGCGC GGGCATGGGC ATCGTGCTGG CCGACGGCGC CAACGCCATG
GCGGTGTCGG ACGCCGTGGC CGCCAAGCTG GCGGAGCTCA AGCCCTACTT CCCCAACCAG
ATCGACTATT TCGTCAGCTC CGACTCCACG CCCTTCGTGC GCGCCTCGAT CCGCGAAGTG
GCCACCGCGC TGGGCGAGGC CATGGTGCTG GTGGTGATCG TGATGTTCAT CTTCCTGCAG
AACTTCCGCG CCACGCTGAT CCCTGCGATC GCCGTGCCAG TGGTGCTGCT GGGCACCTTC
GGCGTGCTGG CCGCGGCGGG TTACTCGATC AACACGCTGA CCATGTTCGC GCTGGTGCTG
GCCATCGGCC TGCTGGTGGA CGACGCCATC GTGGTGGTGG AGAACGTCGA GCGCGTGATG
CACGAGTCGG GTCTCTCGCC CAAAGAGGCC ACGCGCCACT CGATGCGCGA GATCACGCCC
GCGCTGGTGG GCATCGGCCT CACGCTGTCG GCGGTGTTCG TGCCGATGGC GTTCTTCGGC
GGCTCCACGG GGGTGATCTA CCGGCAGTTC TCCATCACCA TCGTGGCGGC GATGGCGCTG
TCGGTGCTGG TGGCGCTCAC GCTCACGCCG GCGCTGTGCG CCAGCATCCT CAAGCCGTCC
GCCCACCTGG GCAAGGACCC GCAGGTGCGC CGCGGCCTGC TGGGGCTGAA CGACCGCTTC
TTCGTCTGGT TCAACCGCCA CTTCGAGACC AACACGCTGC GCTACCAGCG CGGCGTGGGC
TGGATGCTGC ACCGCGCCAA GCGCATGCTG CTGATCTTTG CCGCCATCTG CCTGGCCGTG
TGGTGGATCA TCGGCCGCGT GCCGACGGCC TTCCTGCCCG ATGAAGACCA GGGCTACATC
CTGGCCAACG TCAACCTGCC CGCTGGAGCC ACCGACGCGC GACTGCAGGA CGTGCTGGAC
CAGGTGAATC TGTACTTCAA GGACGTGCCC GAGGTCATCA GCTTCAACCA GGTCTCGGGC
CTGAACGGCG ACCAGAGCTC GGCGCGCGCA TTCATCCGCC TCAAGCCCTG GGACCAGCGG
CCGCTGGCCA GCCAGTCCGC GGCGGCCATC GCCCACCGCG CCACCCAGGA GCTGGCCAAG
ATCCGCGACG CGCGCATCTT CGTGTCGCAG CCGCCGGCCG TGCGCGGCCT GGGCTCCAAC
GCGGGCTTCA ACTTCATGCT CAAGGACATC AACGGCCTGG GGCACGAGGC GCTGCTGGCC
GCCAAGGACC GGTTCCTGGC CGAGGCGCGC AAGCACCCCG AGCTGACCAA CCTGCGCACC
ACCAACCTAG ACGACGCCAC CGAGCTGCGC CTGGACATCG ACGACCGCAA GGCCGCCGCG
CTGGGCCTGA ACTACGACGC CATCAACAGC GTGCTCTCCA GCGGCATGGG CGGCACCTAC
GTGAACGACT TTCTGAACAA CGGCCGCGTC AAGCGCGTCT ACATCCAGGG CGACGCGCCG
CACCGCATGC TGCCGCAGGA CATCGGCAAG TGGACCGTGC GCAACAAGAA CGGCGAGATG
GTGCCGTTCG GCGCCTTCTC CAAGGCCCAC TGGGCTTATG GCTCGCCGCA GCTCATGCGC
TACAACGGCG CGCCCGCCTA TGAGATGGTG GGCAGCGCCG CGCCGGGCGT CAGCTCGGGC
GTGGCCATGA AGATCGTGGA GGACATCCTC AAGGGCCTGC CGCCCGGCAT TGCGTACGAA
TGGACGGGCG CCTCGCTGCA GGAGCGCCAA TCCGGCGCGC AGGCGCCGCT GCTGTACGCC
ATCTCGATCC TGTTCGTGTT CCTGTGCCTG GCCGCGCTGT ACGAGAGCTG GACCGTGCCC
CTGTCGGTGA TGCTGGCCGT GCCGCTGGGC GTGCTGGGCG CGCTGCTGGC GACCTGGACG
CGGGGCCTGG CCAACGACGT GTACTTCCAG GTCGGCCTGA TCACCACGGT GGGCCTGGCC
TCCAAGAACG CCATCCTGAT CGTCGAGTTT GCCGTGCAGT TGCAGGAACA GGGCCGCAAG
CTGCTGGATG CCACGCTGGA AGCCGTGCGC ATGCGCCTGC GCCCCATCCT CATGACATCG
CTGGCCTTCG GCTTCGGCGT GGTGCCGCTG GCCCTGGGCA CGGGCGCCGG CGCAGGCGGG
CGCAACGCCA TCGGCACGGC CGTGCTGGGC GGCACCGTGG CCTCCACGGT GCTGGGCATC
TTCATGGTGC CGGTGTTTTT CCTGCTGATC CGCAGCTGGT TCAAGAGCCG CTCGCGCCAG
GAAGACGCGG CCCAGCCTGC CCCCATCCAT CCGGAGAGTG CCGCATGA
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| Protein sequence | MAQFFINRPI FAWVLSIIIM LAGGLAIFTL PLEQYPDIAP PRVTISAQYT GASAETVENS
VTQIIEQQLK GIDNMIYMGS TSDASGRSAT TLTFAPGTNI DVAQVQVQNK LQSAMNRLPD
AVKSRGVFVN KGGQDYLVTY SFFSGDPNMS AVDIGDYLNS NLVDVIGRLD GVGDIRVFGT
FYAMRLWMDP AKMEKFQLMP SDLISALNAQ NAQVSAGQLG ALPAVPDQQL NATITARTKL
QTVQEFEDIV LKTATDGSVV TVKDVARVEL GPDNLSVKAK LNGRPGAGMG IVLADGANAM
AVSDAVAAKL AELKPYFPNQ IDYFVSSDST PFVRASIREV ATALGEAMVL VVIVMFIFLQ
NFRATLIPAI AVPVVLLGTF GVLAAAGYSI NTLTMFALVL AIGLLVDDAI VVVENVERVM
HESGLSPKEA TRHSMREITP ALVGIGLTLS AVFVPMAFFG GSTGVIYRQF SITIVAAMAL
SVLVALTLTP ALCASILKPS AHLGKDPQVR RGLLGLNDRF FVWFNRHFET NTLRYQRGVG
WMLHRAKRML LIFAAICLAV WWIIGRVPTA FLPDEDQGYI LANVNLPAGA TDARLQDVLD
QVNLYFKDVP EVISFNQVSG LNGDQSSARA FIRLKPWDQR PLASQSAAAI AHRATQELAK
IRDARIFVSQ PPAVRGLGSN AGFNFMLKDI NGLGHEALLA AKDRFLAEAR KHPELTNLRT
TNLDDATELR LDIDDRKAAA LGLNYDAINS VLSSGMGGTY VNDFLNNGRV KRVYIQGDAP
HRMLPQDIGK WTVRNKNGEM VPFGAFSKAH WAYGSPQLMR YNGAPAYEMV GSAAPGVSSG
VAMKIVEDIL KGLPPGIAYE WTGASLQERQ SGAQAPLLYA ISILFVFLCL AALYESWTVP
LSVMLAVPLG VLGALLATWT RGLANDVYFQ VGLITTVGLA SKNAILIVEF AVQLQEQGRK
LLDATLEAVR MRLRPILMTS LAFGFGVVPL ALGTGAGAGG RNAIGTAVLG GTVASTVLGI
FMVPVFFLLI RSWFKSRSRQ EDAAQPAPIH PESAA
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