| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2252 |
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| Symbol | |
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| ID | 7384845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 2395892 |
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| End bp | 2398261 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643655561 |
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| Product | Lysine decarboxylase |
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| Protein accession | YP_002553690 |
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| Protein GI | 222111426 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTC GCTTTCCCAT CGTCATCATC GACGAGGACT ATCGTTCAGA GAACACCTCC
GGCCTGGGGA TTCGGGCGCT GGCGCAGGCC ATCGAGGCGG AAGGGTTCGA GGTCTTGGGA
GTGACCAGCT ACGGCGACCT GTCCCAGTTC GCCCAGCAGC AAAGCCGCGC CAGCGCGTTC
ATCCTGTCGA TCGACGACGA GGAATTCACG CTGGGCACGG GCCAGGACCC CATCGTGCAC
AGCCTGCGCG CCTTCATCGA AGAGGTGCGC CGCAAGAACG CCGACGTGCC GATCTACGTG
CACGGCGAGA CCAAGACCGC GCGCCATCTG CCCAACGACA TCCTGCGCGA GCTGCACGGC
TTCATCCACA TGTTCGAGGA CACGCCCGAG TTCGTGGCCA AGCACATCAT CCGCGAGGCC
AAGAGCTACC TGGAGGGCGT GCAGCCGCCA TTCTTCAAGG CGCTGCTGGA CTACGCGGAA
GACGGCTCCT ACAGCTGGCA CTGCCCGGGC CACTCGGGCG GCGTGGCGTT CCTCAAGAGC
CCCGTGGGCC AGATGTACCA CCAGTTCTAT GGTGAGAACA TGCTGCGCGC GGACGTCTGC
AATGCCGTGG AAGAACTGGG CCAGTTACTG GACCACAACG GCGCCATCGG CGAGAGCGAG
CGCAACGCCG CGCGCATCTT CAACGCCGAC CACTGCTTCT TCGTGACCAA CGGCACGTCC
ACCTCCAACA AGATGGTGTG GCACCACACC GTGGCACCGG GCGACGTGGT GGTGGTGGAC
CGCAACTGCC ACAAGTCCAT CCTGCACAGC ATCATCATGA CCGGGGCGAT CCCCGTGTTC
CTGAAACCCA CGCGCAACCA CTTCGGCATC ATCGGGCCCA TTCCGCAAAG CGAATTCGAG
CCCGCGACCA TCCAAGCCAA GATCAAGGCC AACCCGCTGC TCAGGGGCGT GGACGCCAAG
AAGGTCAAGC CGCGCGTGCT GACCCTCACG CAGTCGACCT ACGACGGCGT GCTCTACAAC
ACCGAGACCA TCAAGGGCAT GCTCGACGGC TACGTCGAGA ACCTGCACTT CGACGAGGCC
TGGTTGCCGC ATGCGGCCTT CCACCCGTTC TACGGCAGCT ACCACGCCAT GGGCAAGAAG
CGCGCGCGGC CCAAGCAGTC GGTGGTGTAC GCCACGCAGT CCATCCACAA GCTGCTGGCC
GGCATCAGCC AGGCCAGCCA TGTGCTGGTG CAGGACAGCC AGACCACCAA GCTGGACCGT
CACCTGTTCA ACGAGGCGTA CCTGATGCAC ACCTCGACCA GCCCGCAGTA CAGCATCATC
GCCAGCTGCG ACGTGGCTGC AGCCATGATG GAGCCGCCCG GCGGCACCGC CCTGGTGGAG
GAAAGCCTGG TCGAAGCGCT GGACTTTCGC CGCGCCATGC GCAAGGTGGA GGACGAATTC
GGCAAGGACG ACTGGTGGTT CAAGGTCTGG GGCCCCGACA AGCTCGCCGA CGAGGGTGTG
GGCCGCGCAG ACGACTGGAT CATCCGCGGC GACGCCAAGG GCAAGAAGAA CGGCCCGAGC
AAGTGGCATG GCTTCGGCGC GCTGGCCGAC GGCTTCAACA TGCTGGACCC GATCAAGTCC
ACCATCGTCA CGCCCGGCCT GAACCTGGAC GGCAAGTTCG ACAAGACCGG CATTCCGGCC
AGCATCGTCA CCAAATACCT GTCTGAGCAC GGCGTGGTGG TGGAGAAGAC GGGCCTGTAC
TCGTTCTTCA TCATGTTCAC CATCGGCATC ACCAAGGGCC GCTGGAACAC GCTGCTGGCC
GCGCTGCAGC AGTTCAAGGA CGACTACGAG AAGAACCAGC CCATGTGGCG CATCCTTCCC
GAGTTCTGCC AGCAGCACAA GCGCTACGAG CGCATGGGCC TGAAGGACCT GTGCCAGCAC
GTGCACCAGC TGTACGCCAA GTACGACATC GCCCGCCTGA CGACCGAGAT GTACCTCTCG
GACCTCACGC CCGCCATGAA GCCCAGCGAC GCCTATGCCC ACATCGCGCA GCGCAAGACC
GAGCGCGTGG AGATCGACCA ACTGGAAGGC CGCATCACCA CCAGCCTGAT CACGCCGTAC
CCGCCGGGTA TTCCGCTGCT GATTCCCGGC GAGGTGTTCA ACAAGAAGAT CGTGGACTAC
CTCAAGTTCT CGCGCGAGTT CTCCAAGCTC TGCCCGGGGT TCGAGACCGA CATCCACGGC
CTGGTGGAGA TCGAGGACGA CAACGGCAAC GTGCGTTATT ACGCCGACTG CGTGGCGCAG
GGCACGGGCG GCAGCCGCAA GCCCCGCGCC AACGACCCTG AGTCGCTGGT GCAGGTGGGC
AGCGACGGCC CGTTTGGCCG CACCATCTGA
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| Protein sequence | MKFRFPIVII DEDYRSENTS GLGIRALAQA IEAEGFEVLG VTSYGDLSQF AQQQSRASAF
ILSIDDEEFT LGTGQDPIVH SLRAFIEEVR RKNADVPIYV HGETKTARHL PNDILRELHG
FIHMFEDTPE FVAKHIIREA KSYLEGVQPP FFKALLDYAE DGSYSWHCPG HSGGVAFLKS
PVGQMYHQFY GENMLRADVC NAVEELGQLL DHNGAIGESE RNAARIFNAD HCFFVTNGTS
TSNKMVWHHT VAPGDVVVVD RNCHKSILHS IIMTGAIPVF LKPTRNHFGI IGPIPQSEFE
PATIQAKIKA NPLLRGVDAK KVKPRVLTLT QSTYDGVLYN TETIKGMLDG YVENLHFDEA
WLPHAAFHPF YGSYHAMGKK RARPKQSVVY ATQSIHKLLA GISQASHVLV QDSQTTKLDR
HLFNEAYLMH TSTSPQYSII ASCDVAAAMM EPPGGTALVE ESLVEALDFR RAMRKVEDEF
GKDDWWFKVW GPDKLADEGV GRADDWIIRG DAKGKKNGPS KWHGFGALAD GFNMLDPIKS
TIVTPGLNLD GKFDKTGIPA SIVTKYLSEH GVVVEKTGLY SFFIMFTIGI TKGRWNTLLA
ALQQFKDDYE KNQPMWRILP EFCQQHKRYE RMGLKDLCQH VHQLYAKYDI ARLTTEMYLS
DLTPAMKPSD AYAHIAQRKT ERVEIDQLEG RITTSLITPY PPGIPLLIPG EVFNKKIVDY
LKFSREFSKL CPGFETDIHG LVEIEDDNGN VRYYADCVAQ GTGGSRKPRA NDPESLVQVG
SDGPFGRTI
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