Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2236 |
Symbol | |
ID | 7384547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 2378238 |
End bp | 2379101 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643655544 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002553674 |
Protein GI | 222111410 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.983394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCAGC ACCTCGCCGC CTTTCAGCAG CACCGCCCAC GCCTGGCGGG CGTGGCCTAT CGCATGCTGG GCAGCCGCAC CGATGCCGAG GACGTGCTGC AGGATGCCTG GCTGCGTTGG CAGGCGACGG CCCTGGAGCG CGTGCAGACG GCCGAGGCCT GGCTGATCAC CACCGTCACC CGGCTGTGCG TGGACCGGCT GCGCGCCGCG CGCATCGAAC GCACGGCCTA TGACGGGCCC TGGCTGCCGG AACCGTGGAT CGCCGGCGAC AGCGCCCCGG CCGCCGATGC ACGCGCCGAA CTGGCCAGCG ACCTGTCCGT GGCGCTGCTC GTGGTGCTGG AGCGCCTCAC GCCCGACGAG CGCGCCGCCT TCCTGCTGCA CGACGTGTTC GACAGCGACT ACCCCGAGGT GGCGAGCGTA CTCGGCAAGA GCGAGGCCGC CTGCCGCCAG CTGGTGCACC GCGCGCGCAC CCAGGTGCGC CAGCGCAGGG CGCGCTTCAC GGCCACACCC GAGGCGTCGC GTGCGCTGGT GGAACGCTTC GTGCAGGCCA TGCGCACGCA GGACCATGCG GCGCTGCTGG CGCTGTTCGC CAAGGATGCG CAGTGGACCG CCGACGGCGG CGGCAAGGTG CGCGCGGCCG CCAAGCTGCT GCACGGACCG CGTGCGATCG CACGCCTGGC CGCGTCGGTG TGGCGCCTCT ATCTGAGCCA CCAGACCATG GAGGTGGTGG ACGTCAACGG CGGCCCCGGG CTGCTGCTGC GCGACGCGGG CGGCGTGCGC GCCGTCATGG CCTTCGAGAC CGACGGCGTA CACATCCACG CGGTGTATTC CGTCCTCAAC CCCGACAAGC TGCGCGGCCT GTAG
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Protein sequence | MDQHLAAFQQ HRPRLAGVAY RMLGSRTDAE DVLQDAWLRW QATALERVQT AEAWLITTVT RLCVDRLRAA RIERTAYDGP WLPEPWIAGD SAPAADARAE LASDLSVALL VVLERLTPDE RAAFLLHDVF DSDYPEVASV LGKSEAACRQ LVHRARTQVR QRRARFTATP EASRALVERF VQAMRTQDHA ALLALFAKDA QWTADGGGKV RAAAKLLHGP RAIARLAASV WRLYLSHQTM EVVDVNGGPG LLLRDAGGVR AVMAFETDGV HIHAVYSVLN PDKLRGL
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