Gene Dtpsy_2236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_2236 
Symbol 
ID7384547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp2378238 
End bp2379101 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content73% 
IMG OID643655544 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002553674 
Protein GI222111410 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.983394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCAGC ACCTCGCCGC CTTTCAGCAG CACCGCCCAC GCCTGGCGGG CGTGGCCTAT 
CGCATGCTGG GCAGCCGCAC CGATGCCGAG GACGTGCTGC AGGATGCCTG GCTGCGTTGG
CAGGCGACGG CCCTGGAGCG CGTGCAGACG GCCGAGGCCT GGCTGATCAC CACCGTCACC
CGGCTGTGCG TGGACCGGCT GCGCGCCGCG CGCATCGAAC GCACGGCCTA TGACGGGCCC
TGGCTGCCGG AACCGTGGAT CGCCGGCGAC AGCGCCCCGG CCGCCGATGC ACGCGCCGAA
CTGGCCAGCG ACCTGTCCGT GGCGCTGCTC GTGGTGCTGG AGCGCCTCAC GCCCGACGAG
CGCGCCGCCT TCCTGCTGCA CGACGTGTTC GACAGCGACT ACCCCGAGGT GGCGAGCGTA
CTCGGCAAGA GCGAGGCCGC CTGCCGCCAG CTGGTGCACC GCGCGCGCAC CCAGGTGCGC
CAGCGCAGGG CGCGCTTCAC GGCCACACCC GAGGCGTCGC GTGCGCTGGT GGAACGCTTC
GTGCAGGCCA TGCGCACGCA GGACCATGCG GCGCTGCTGG CGCTGTTCGC CAAGGATGCG
CAGTGGACCG CCGACGGCGG CGGCAAGGTG CGCGCGGCCG CCAAGCTGCT GCACGGACCG
CGTGCGATCG CACGCCTGGC CGCGTCGGTG TGGCGCCTCT ATCTGAGCCA CCAGACCATG
GAGGTGGTGG ACGTCAACGG CGGCCCCGGG CTGCTGCTGC GCGACGCGGG CGGCGTGCGC
GCCGTCATGG CCTTCGAGAC CGACGGCGTA CACATCCACG CGGTGTATTC CGTCCTCAAC
CCCGACAAGC TGCGCGGCCT GTAG
 
Protein sequence
MDQHLAAFQQ HRPRLAGVAY RMLGSRTDAE DVLQDAWLRW QATALERVQT AEAWLITTVT 
RLCVDRLRAA RIERTAYDGP WLPEPWIAGD SAPAADARAE LASDLSVALL VVLERLTPDE
RAAFLLHDVF DSDYPEVASV LGKSEAACRQ LVHRARTQVR QRRARFTATP EASRALVERF
VQAMRTQDHA ALLALFAKDA QWTADGGGKV RAAAKLLHGP RAIARLAASV WRLYLSHQTM
EVVDVNGGPG LLLRDAGGVR AVMAFETDGV HIHAVYSVLN PDKLRGL