| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2184 |
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| Symbol | |
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| ID | 7384489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 2323781 |
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| End bp | 2325394 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643655488 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002553624 |
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| Protein GI | 222111360 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG0845] Membrane-fusion protein
[COG5569] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.580159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACAG GTTTCAAGAC CGGTGTACTC CTGGCTATCG TCGCCGCAGG GTTGGCGGCG
GGCGGTGGCT ATTGGATGGG GCAGCGCCAA TCCGAAGCCC AAAGCGGTGA CCAGACTGCG
TCGCCAGGCG CTTCTACCGT TGCCGCCAAG AAGGAGCGCA AGGTACTTTT CTACCGTAAC
CCGATGGGGC TGCCCGACAC ATCTCCCACA CCGAAAAAAG ATTCGATGGG GATGGATTAC
ATCCCGGTCT ATGAGGGGGA GCAGGAAGAA GCAGAAACCA ATTCCAACCA AATTCGCATC
AGTACCGAAA AGATTCAGAA ACTCGGCGTG CGCACCGAGG CGGTAAGTCT GCGTTCTCTG
GACAAGGTGG TACGTGCCGC CGGCCGCATC GAACCAGACG AGCGCCAGAC CTTCACCATC
GCTGCCAAAT TTGAGGGCTA CGTCGAGCGT TTGCATGTCA ACGTCACGGG ACAGGCGGTG
AGCAAAGGGC AACCACTGTT CGAGGTCTAC AGTCCCGAAC TGGTGTCCGC TCAGCGCGAG
TACGCCATCG CGGCACAGGG TGTCGATGCG TTGAAGGGGG CCTCCGGAGA GGCACAGCGT
GGCATGCGTG AGCTGGCCGA CTCCAGCCTG GCGCGGCTTC GCAATTGGGA CATCTCGGAC
GAGCAAGTCA AGGCCCTGGC CAAATCCGGC GAATCACGCC GCACGCTGAC ATTCCGCTCA
CCGGTGGCGG GGATCATCAC CGACAAGAAG GCCGTCCAAG GCATGCGCTT CATGCCGGGT
GAGATGCTCT ATCAGGTTGC GAACCTGTCC TCGGTCTGGG TCATCGCGGA TGTCTTCGAG
CAAGACATCG GATTGGTCAA GTTGGGGGGA AAAGCCAAGG TGCAAATCAA TGCCTACCCA
GACAAGATGT TTCAGGGGGC GGTCAGCTAT GTGTACCCCA CCCTGAAGCC TGAAACCCGA
ACGGTGCAGG TGCGCGTCGA TTTGTCGAAC ACGGGGGGCT TGCTCAAGCC GGGCATGTTT
GCCCAGGTGG AGCTTCCGAC CGCCAGCAAG GGCACTGTTT TGACAGTGCC GACTTCGGCT
GTGATTGACA GCGGCACGCG CCAGATTGTC CTGGTGCAAC TCAAGGAAGG CCGATTCGAA
CCTCGCGATG TCAAAGTGGG CGCACGCAGC GACGACCGCG TTGAAGTGAT CGAAGGCGTA
CGCGAGGGAG AACAGGTGGT CATCGCTGCC AATTTCCTGA TCGATGCAGA AAGCAACCTC
AAGGCGGCCG TGGGGGGCTT TGGGCACTCC TCACATGGAA CTAAGCCGGG CGCACAAGGC
ACCCCGGATC TGATTAAGCC TGCTGCCTCC GTCGGACATC AGGGTGAAGG CAAGGTGGAG
GAGTTTGATG CCAAGGCCGG CACGGTCACT ATTGCCCATG GCTCCATACC TACCCTCAAA
TGGCCCGCGA TGTCTATGGA GTTCAGGGTC TCCAACAACG GGCTGCTGGA GGGCATCAAG
CCTGGCGCAT TGGTCGCCTT CGAGTTTGTT GAGCGTGGAC AGGGCGAATG GGTGATCACC
TCCGTGAAAC CCGTGGGCAG CGCGGCTGCC AATGCGCACA CCGGCCATAA CTGA
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| Protein sequence | MTTGFKTGVL LAIVAAGLAA GGGYWMGQRQ SEAQSGDQTA SPGASTVAAK KERKVLFYRN
PMGLPDTSPT PKKDSMGMDY IPVYEGEQEE AETNSNQIRI STEKIQKLGV RTEAVSLRSL
DKVVRAAGRI EPDERQTFTI AAKFEGYVER LHVNVTGQAV SKGQPLFEVY SPELVSAQRE
YAIAAQGVDA LKGASGEAQR GMRELADSSL ARLRNWDISD EQVKALAKSG ESRRTLTFRS
PVAGIITDKK AVQGMRFMPG EMLYQVANLS SVWVIADVFE QDIGLVKLGG KAKVQINAYP
DKMFQGAVSY VYPTLKPETR TVQVRVDLSN TGGLLKPGMF AQVELPTASK GTVLTVPTSA
VIDSGTRQIV LVQLKEGRFE PRDVKVGARS DDRVEVIEGV REGEQVVIAA NFLIDAESNL
KAAVGGFGHS SHGTKPGAQG TPDLIKPAAS VGHQGEGKVE EFDAKAGTVT IAHGSIPTLK
WPAMSMEFRV SNNGLLEGIK PGALVAFEFV ERGQGEWVIT SVKPVGSAAA NAHTGHN
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