| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2153 |
|---|
| Symbol | |
|---|
| ID | 7383088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2299187 |
|---|
| End bp | 2301361 |
|---|
| Gene Length | 2175 bp |
|---|
| Protein Length | 724 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643655466 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_002553602 |
|---|
| Protein GI | 222111338 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00626662 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCAC ATCCCCACGC AGCGGTTGCC GGCACAACGA AGTCGAACGT CGGCGCGGAT
GCCGGATACA CATGTCCCAT GCACCCGCAG GTGCGGCAGA CAGGGCCCGG GATCTGCCCG
ATCTGCGGCA TGGCCCTGGA GCCCGTCGTC ATGACCGCTG CGACTGGAGA GAGTGCCGAG
TTGCGGGACA TGAGCCACAG GTTCTGGGTG GGCCTGGCGC TCAGTTTGCC CGTGGTAATG
CTCGAGATGG GCGCTCACCT CGTCGATCTT CATCGCCTGG TAGGCCCGCA AACATCCAAT
TGGCTGCAAT TGCTTTTCGG CACTCCGGTC GTTGTCTGGG CCGGCTGGCC GTTCTTCGTG
CGAGGCTGGG CTTCGGTGGA GAACCGCAAC CTCAACATGT TCAGTCTCAT CGCCCTGGGC
ACGGGGGTCG CATGGGTCTA CAGCGTTGTT GGCACGGCGG CGCCAGGGGT GTTTCCGGCA
GAGTTGCGCA TGGCAGGCGG AGCGGTCGCG GTCTACTTCG AAGCCGCTGC AGTTATCACG
GTCCTGGTTC TCCTGGGGCA AGTCCTCGAA CTGCGCGCAC GCGAGAAAAC TTCCGGGGCA
ATACGCGCGC TGCTCGACCT GGCACCGAAA ACGGCTCTGC GCGTGAACGC CGATGGCTCT
GATGAGACAG TCGAGCTCGA CACCGTTGGA GTGGGGGAGC GGCTGCGGGT GCGTCCCGGC
GAAAAGGTTC CCGTGGACGG CGAAGTGGTG GAAGGCAGGG CGACGCTCGA CGAGTCGATG
GTCACCGGTG AGCCCATTCC CGTCGTCAAG GCACCAGGCT CCAAGGTCAC AGCGGGAACA
ATGAATCAAA ACGGCGGTTT CGTCATGCGT GCCGAGAAAG TGGGAGCGGA CACCTTGCTC
GCGCAGATCG TCCGCATGGT CGCGTCCGCG CAGCGCAGTC GTGCGCCAAT CCAGCGAATG
GCCGACCAGT TCGCAGGCTG GTTTGTTCCG ATCGTCATTG CCGTTGCGCT CATTGCCTTT
GTTGTCTGGC TCGTCTGGGG CCCCAGCCCA GCCCTGTCGT ACGCGCTCAT CTCGGCGGTG
TCGGTGCTCA TCATCGCCTG CCCTTGCGCC TTGGGATTGG CCACGCCCAT GTCCATCATG
GTCGGAGTTG GAAAAGGCGC CCAGCATGGC GTACTGATCC GCGATGCCGA GGCACTGGAG
CGCATGGAGA AAGTGGACAC GCTGGTGGTT GACAAGACGG GCACCTTGAC AGAGGGGCGG
CCGAAGGTGG TGCATATTGA GCCAGCGCCG GGCTTCGATG CCGCCACCCT GCTCCGGAAG
CTCGCCAGCG TGGAACGCGC CAGCGAGCAC CCGCTGGCCG CCGCCATCAT GGCCGACGCC
CAGGCGCGCC GATTGCAGCT GTCGCCTGTC AACGATTTCG ACTCCCCCGT CGGTCAGGGC
GTGGTGGGGA GCGTCGACGG TACGCGGGTG GTTTCAGGAA GCGCAAAGTT CCTGAAGGAA
AGCGGCATAA ATGTTGACGC CGTGAATGCG GTGGCGGAGG GCTTTCGCGC CCAGGCTGTG
ACGGTCATCT TCGTGGGCTT CGACGATCAA GTGGCGGGTT TTGTCGGCGT TGCTGACCCG
ATCAAGATGA ACACGCAGGA GGCGATTTCG GTGCTGCGCA GCGAAGGTAT TCGTGTCGTC
ATGCTCACTG GCGATGGCAA GACCACCGCA CAGGCCGTGG GCCGACAACT CGGCATAGAC
GATGTGATCG CAGACGTTCT GCCGCAGGAC AAGGCGGCCG TGGTTCAGCG GCTGAAGGCA
GAAGGCCGCG TCGTGGCCAT GGCAGGCGAC GGCGTCAATG ACGCGCCTGC ATTGGCTGCG
GCGGACGTCG GTATCGCGAT GGGGACAGGC ACGGATGTGG CCATGGAAAG CGCGGGCGTG
ACGCTCTTGC ACGGCGACCT CATGGGCATC GTGCGCGCTC GCCGGCTCTC GCAGGCGACG
ATGAGGAACA TCAGGGCGAA CCTGTTCTTT GCCTTCGTCT ACAACGCGGC GGGGATCCCG
TTGGCTGCCG GTTTGCTCTA CCCGTTTCTC GGCATTCTCT TGTCGCCGAT GATCGCCGCG
GCTGCAATGG CGCTGTCGTC GGTCAGCGTC ATTGCCAATT CGCTTCGTCT GCGAACGAGC
GATGTGGCCG ATTGA
|
|---|
| Protein sequence | MKPHPHAAVA GTTKSNVGAD AGYTCPMHPQ VRQTGPGICP ICGMALEPVV MTAATGESAE
LRDMSHRFWV GLALSLPVVM LEMGAHLVDL HRLVGPQTSN WLQLLFGTPV VVWAGWPFFV
RGWASVENRN LNMFSLIALG TGVAWVYSVV GTAAPGVFPA ELRMAGGAVA VYFEAAAVIT
VLVLLGQVLE LRAREKTSGA IRALLDLAPK TALRVNADGS DETVELDTVG VGERLRVRPG
EKVPVDGEVV EGRATLDESM VTGEPIPVVK APGSKVTAGT MNQNGGFVMR AEKVGADTLL
AQIVRMVASA QRSRAPIQRM ADQFAGWFVP IVIAVALIAF VVWLVWGPSP ALSYALISAV
SVLIIACPCA LGLATPMSIM VGVGKGAQHG VLIRDAEALE RMEKVDTLVV DKTGTLTEGR
PKVVHIEPAP GFDAATLLRK LASVERASEH PLAAAIMADA QARRLQLSPV NDFDSPVGQG
VVGSVDGTRV VSGSAKFLKE SGINVDAVNA VAEGFRAQAV TVIFVGFDDQ VAGFVGVADP
IKMNTQEAIS VLRSEGIRVV MLTGDGKTTA QAVGRQLGID DVIADVLPQD KAAVVQRLKA
EGRVVAMAGD GVNDAPALAA ADVGIAMGTG TDVAMESAGV TLLHGDLMGI VRARRLSQAT
MRNIRANLFF AFVYNAAGIP LAAGLLYPFL GILLSPMIAA AAMALSSVSV IANSLRLRTS
DVAD
|
|---|
| |