Gene Dtpsy_2090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_2090 
Symbol 
ID7383025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand- 
Start bp2246334 
End bp2246993 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content66% 
IMG OID643655409 
ProductHhH-GPD family protein 
Protein accessionYP_002553545 
Protein GI222111281 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.72517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGCTA CTAAAAAAAT AGCGGATGCA CCTCCGTCCC TCACGCCCCC CAGCTATTGG 
GAAGAGGCCT GCCGGCATCT GACCAAGAAG GACCGCGTGA TGCGTCGCCT GATTCCCCAG 
GTGGGCAACG TGGCCCTGAG CCAGCGCGGC GACGCCTTCA CCACGCTGGC GCGCTCCATC 
GTGGGCCAGC AGGTGTCGGT GGCGTCGGCG CAGCGGGTGT GGGACCAGTT CGCCGCGCTG 
TCGCGCAGCA TGACGCCGCG CAGCGTGCTC AAGCTCAAGG TGGACGACAT GCGTGCGGCC 
GGCCTGTCGG CACGCAAGGT GGAGTACCTG GTGGACCTGG CGCTGCACTT CGACAGCGGC 
CGGCTGCACG TGAAGCAGTG GGACGAGATG GACGACCAGG CCATCGTTGC CGAGCTGGTG 
GCGATCCGCG GCATCAGCCG CTGGACGGCA GATATGTTCC TCATCTTCCA TCTGGCGCGG 
CCGAACGTGC TGCCGCTGGA CGATGCCACG CTGATCCAGG GCATCAGCCA GCATTATTTT 
TCGGGCGATC CGGTCAGCCG CAGCGATGCG CGCGAAGTGG CTGATGCGTG GAAACCCTGG 
TGCAGCGTGG CGAGTTGGTA TATTTGGCGG TCGCTCGCCC CCCTGCCGGT GGACTACTGA
 
Protein sequence
MAATKKIADA PPSLTPPSYW EEACRHLTKK DRVMRRLIPQ VGNVALSQRG DAFTTLARSI 
VGQQVSVASA QRVWDQFAAL SRSMTPRSVL KLKVDDMRAA GLSARKVEYL VDLALHFDSG 
RLHVKQWDEM DDQAIVAELV AIRGISRWTA DMFLIFHLAR PNVLPLDDAT LIQGISQHYF 
SGDPVSRSDA REVADAWKPW CSVASWYIWR SLAPLPVDY