| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2082 |
|---|
| Symbol | |
|---|
| ID | 7385075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 2235868 |
|---|
| End bp | 2236728 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643655400 |
|---|
| Product | 2,3-dimethylmalate lyase |
|---|
| Protein accession | YP_002553537 |
|---|
| Protein GI | 222111273 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.218009 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTCCA CCAAGCAACA ACTCAAGGCC CTGGCCGAAG CCCGGCGCGG CGTCATCGTG
CCGGGCGCGT TCAACGCACT GTCGGCCAAG GTCATCGAAG ATCTGGGCTA CGAGGCCCTC
TACGTCACCG GCGCGGGCGT CACCAACATG GGGTTCGGCC TGCCCGACCA GGGCTTCATG
GGCCTGACCG ATATCGCCGA CCACACGGCC CGCATCCGCG ACGCGGTGGA GCTGCCGCTG
ATCGTGGACG CGGACACGGG CTTCGGCAAC GCCCTCAACA CCTACCACGC CGTGCGCACC
CTGGAGCGCG CCGGCGCCGA CTGCATCCAG CTCGAAGACC AGGTGAGCCC CAAACGCTGC
GGCCACTTCA GCGGCAAGGC CGTGATCGAG ACCAGCGAGA TGGTGAGCAA GATCCGCGCC
GCTGTGGATG CGCGGCGCGA CGGCCTGCTG GTCATGGCGC GCACCGACGC CGCCGCCGTG
CACGGCTTCG ACGCCGCCGT GGAGCGCGCG CAGGCGTACG CCGAGGCGGG CGCCGACATC
CTCTTCGTGG AGGCCGTCAC CACGGCCGAG CATGTGCGCG CCCTGCCCCA GCGCCTGCAA
GTGCCCCAGC TCATGAACAT GGTGATCGGC GGCAAGACAC CCATCGTGGG CGCCGACGAA
CTGGGCCGGC TCGGCTACGG CTTCGTGCTG TACGCCAACG CTGCGCTGCA AGGCGCCGTG
GCCGGCATGC AAAAAGTGCT GGCCCAGTTG CGCGACGCGC GCGAGGTGCG CGAAGACCCC
ACGCTGGTCG CCCCGTTCGC CGAGCGCCAG CGGCTGGTGG GTAAACCATT CTGGGATGCG
CTCGAAAAGA AATACGCATG A
|
|---|
| Protein sequence | MQSTKQQLKA LAEARRGVIV PGAFNALSAK VIEDLGYEAL YVTGAGVTNM GFGLPDQGFM
GLTDIADHTA RIRDAVELPL IVDADTGFGN ALNTYHAVRT LERAGADCIQ LEDQVSPKRC
GHFSGKAVIE TSEMVSKIRA AVDARRDGLL VMARTDAAAV HGFDAAVERA QAYAEAGADI
LFVEAVTTAE HVRALPQRLQ VPQLMNMVIG GKTPIVGADE LGRLGYGFVL YANAALQGAV
AGMQKVLAQL RDAREVREDP TLVAPFAERQ RLVGKPFWDA LEKKYA
|
|---|
| |