| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2081 |
|---|
| Symbol | |
|---|
| ID | 7385074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 2234482 |
|---|
| End bp | 2235684 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643655399 |
|---|
| Product | AcnD-accessory protein PrpF |
|---|
| Protein accession | YP_002553536 |
|---|
| Protein GI | 222111272 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.37249 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACCAC AGATCAGGAT CCCCGCCACC TACCTGCGCG GCGGCACCAG CAAGGGCGTG
TTCTTTCGCC TGCAGGATTT GCCCGCGGCG GCGCAGCAGC CCGGCGCAGC GCGCGACGCG
CTGCTACTGC GCGTGATCGG CAGCCCCGAC CCCTACGGCA AACAGATCGA CGGCATGGGC
GGCGCCACCT CGTCCACGTC CAAGGCGGTG ATCGTCTCGC CCTCCACCCG GCCCGGGCAC
GACGTGGACT ATCTGTTCGG CCAGGTCGCC ATCGACAGCC CCTTCGTGGA CTGGAGCGGC
AACTGCGGCA ACCTGTCGGC CGCCGTGGGG CCGTTCGCCA TCGCCAGCGG CCTGGTCGCG
CCCGGGCGCA TTCCGCACGA CGGCGTGTGC ACCGTACGCA TCTGGCAGGC CAACATCGGC
AAGACCATCG TCGCCCACGT ACCCGTCGCA GGTGGCCAGG TGCAGGAGAC GGGCGACTTT
GCGCTGGACG GCGTGGCCTT CCCCGCCGCC GAGGTGTTGC TCGAATTCCT TGACCCGGCC
GATGGCGGTG AAGGAGGCGA AGGCGGCGGC AGTGCCCTGT TCCCCACCGG CCAGCTGGTC
GATACGCTGG ACGTGCCAGG CGTGGGCCGC TTGCAGGCCA CGCTCATCAA CGCGGGCATC
CCGACCATCT TCCTGAACGC CAGGGACGTC GGCTGCACCG GCACCGAGCT GCAGGACGCG
ATCAATGGCG ATGCCGCGGC CCTGGCCCGC TTCGAGGCCA TCCGCGCCTG GGGCGCAGTC
AAGATGGGCC TGATCCACGA CGTGGCAGAG GCCGCCACGC GCCAGCACAC GCCCAAACTC
GCCTTCGTCG CGCCGCCGGC GGACTACGTC GCCTCCAGCG GCACGGCAGT GCGCGCGGCC
GACATCGACC TGCTGGTGCG CGCACTGTCC ATGGGCAAGC TGCACCACGC CATGATGGGC
ACGGCGGCCG TGGCCATCGG CGCCGCTGCC GCCGTCCCCG GCACGCTGGT CCACCAGGCG
GCCGGCGGGG GCCCGCGCAA CGCCGTGCCG GGATCGGTGC GGTTCGGCCA CCCCTCGGGC
ACGCTGCGCG TGGGGGCCGA GGCCGCGCTG GTGAACGGCC AGTGGCGCGT CACCAAGGCC
CTCATGAGCC GCAGCGCCCG CACCCTGATG GAAGGCTGGG TGAGAGTGCC GCCAACCCCG
TGA
|
|---|
| Protein sequence | MAPQIRIPAT YLRGGTSKGV FFRLQDLPAA AQQPGAARDA LLLRVIGSPD PYGKQIDGMG
GATSSTSKAV IVSPSTRPGH DVDYLFGQVA IDSPFVDWSG NCGNLSAAVG PFAIASGLVA
PGRIPHDGVC TVRIWQANIG KTIVAHVPVA GGQVQETGDF ALDGVAFPAA EVLLEFLDPA
DGGEGGEGGG SALFPTGQLV DTLDVPGVGR LQATLINAGI PTIFLNARDV GCTGTELQDA
INGDAAALAR FEAIRAWGAV KMGLIHDVAE AATRQHTPKL AFVAPPADYV ASSGTAVRAA
DIDLLVRALS MGKLHHAMMG TAAVAIGAAA AVPGTLVHQA AGGGPRNAVP GSVRFGHPSG
TLRVGAEAAL VNGQWRVTKA LMSRSARTLM EGWVRVPPTP
|
|---|
| |