Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2067 |
Symbol | |
ID | 7385060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 2216303 |
End bp | 2217817 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643655385 |
Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
Protein accession | YP_002553522 |
Protein GI | 222111258 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.408282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCTGC ATACCGACGC CTCGCCCTTG CCGCTGGATG CGCAGGGCAT CCTGGAACTG GCTGCGCGCT CCATGTTCCA GCTCTTTTCC ACCATGAGCC AGGGCATGTT CCTCGTGGAC CTGAGCGGGC GCATCGTGTG GGTCAACGAG GGCTACCGCC GCTTCCTGCC CGACCTGGGC GTGCATTCGG TCCATGACTT CGTGGGCCGC ATGGTGGAGG AGGTGATTCC CAACACCCAG ATGCGCCAGG TGCTGGAGAC GGGCCAGCCC GTCCTGGTGG ACCTGCTGAC CAACAAGGCC GGCACGTTCG TGGTCAGCCG CATTCCCCTG CATGGGGATG ATGGGCGCGT GATCGGCGCC ATTGGCATCG TGTTGTTCGA CCATCCGGAA ACCACGCTGC AGCCGCTGAT TGCCAAGTTT GCACAACTCC AGCGCGAGCT GGACGATGCG CGGCGCGAGC TGGCCGCGCA GCGCAGCCGG CTGCCCGTGG CTGGCCCGGG GGTGCGCCGT GCCAAGCACA CGTTCGCCAG CTTCGTGGGT GCCAGCCCCG CAGCCACCGA GGTGAAGCGC CAGGCGCGCC GCGCGGCCCA GTCCCAGAGT CCGGTGTTGC TGTTGGGCGA AACCGGCACG GGCAAGGAGC TGCTGGCCCA TGCCATCCAC GCGGCTTCCA CGCGGGCACA AGGTCCCTTC GTGAGCGTCA ATATCGCCGC CGTGCCCGAC ACATTGCTGG AGGCAGAGTT CTTCGGTGTA GCCCCCGGTG CCTACACCGG TGCCAGCGTG CGGGGCCGGG AGGGCAAATT CAAGCTGGCC GACGGGGGCA CGTTGTTCCT CGACGAGATC GGTGACATGC CCTCCAATCT GCAGGCCAAG CTGCTGCGCG CCCTGCAGGA AGGTGAAATC GAGCCCCTGG GTTCCAATCA GCTCGTACCG TTCGACGTGC GCGTGGTAGC CGCCACTTCG CGCGACTTGG CCGCGCTGGT GCGCGACGGC CTGTTCCGCG AAGACCTCTT CTATCGCCTG CATGTGCTGC CCATCCGCGT GCCACCGCTG CGGGAGCGGC GTGCCGACAT CCCGGCCCTG GTGGAGGCCC TGGCCGACGA CCTGGCTCTG CGCAATGGCA TCGCCCCGCC CGAGCTGCTG CCCGATGCAC TGGCCCTGCT GGGCGCGCAG GCATGGCGCG GAAACATCCG CGAACTGCGC AACGTACTGG AGCAGGCTGC CATGCGCAGC GAAACGCTGA CCGTCGATGC GGAGCAATTG CGTCAGGTGC TGCGCGAAAG CGGCGTCGAA CCCGCAGCGC CCACACCCGA TGCGGGCGGG GTTTCTAGCG GCGACGATGG CGCGGCGCTG CTGCGCCCAT TGGCCGTGCA GGTGGCAGAG CTGGAGCGCC GCGCCATAGC TGCAGCGCTG TCATTGCATG GAGGCAACAA GCTCGCCACG GCGCGGCACC TGGGCATCTC CCGTGCCACG CTCTACGAAC GGATGGGGCA GCCCTTGGCT AACCCTGATA AATAA
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Protein sequence | MPLHTDASPL PLDAQGILEL AARSMFQLFS TMSQGMFLVD LSGRIVWVNE GYRRFLPDLG VHSVHDFVGR MVEEVIPNTQ MRQVLETGQP VLVDLLTNKA GTFVVSRIPL HGDDGRVIGA IGIVLFDHPE TTLQPLIAKF AQLQRELDDA RRELAAQRSR LPVAGPGVRR AKHTFASFVG ASPAATEVKR QARRAAQSQS PVLLLGETGT GKELLAHAIH AASTRAQGPF VSVNIAAVPD TLLEAEFFGV APGAYTGASV RGREGKFKLA DGGTLFLDEI GDMPSNLQAK LLRALQEGEI EPLGSNQLVP FDVRVVAATS RDLAALVRDG LFREDLFYRL HVLPIRVPPL RERRADIPAL VEALADDLAL RNGIAPPELL PDALALLGAQ AWRGNIRELR NVLEQAAMRS ETLTVDAEQL RQVLRESGVE PAAPTPDAGG VSSGDDGAAL LRPLAVQVAE LERRAIAAAL SLHGGNKLAT ARHLGISRAT LYERMGQPLA NPDK
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