| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2066 |
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| Symbol | |
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| ID | 7385059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 2214913 |
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| End bp | 2216112 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643655384 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_002553521 |
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| Protein GI | 222111257 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.438352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCATC GCAGCCTCGC GGCGCGGGCC GGCGGCCTGG CCGCAGCCCT GGCGGCCGCT
CTGACCGCGC CGTTGGCACT GGCTCAGTCC GAGATTCGCA TCGCCCATGT CTATAGCAAG
ACCGGGCCGC TCGAAGCCTA TGGCAAGCAG ACGCAGGCAG GGTTGATGAT GGGGCTGGAT
TACGCCACTG GTGGGACCAT GGCGGTGGCG GGCAAGAAGC TCGTGGTGAT CGAGAAGGAT
GACCAGGGCA AGCCAGACCT GGGCAAGAGC CAGCTGGCAA CGGCGTATTC CGACGATAAG
GCGGACCTGG CGGTGGGCCC CAGCGCCTCG GGTGTGGCGT TGGCCATGCT GCCGGTGGCG
GAGGAATACA AGAAGATCCT GCTGGTCGAG CCCGCGGTGG CGGACTCGAT CACCGGTGAC
AAGTGGAACA AGTACATCTT CCGCACGGGC CGCAATTCCA GCCAGGACGC GATCGGCAAC
GCCGTCGCCA TCGACAAGCC CGGCACCCTC ATCGCCACCC TGGCGCAGGA CAACGCCTTT
GGCCGCGACG GTGTCAACGC CTTCAAGGAT GCCATCAAGA CAGCCAAGCT GGTGCATGAG
GAATACCTGC CCGCGGCCAC CACCGACTTC ACCGCGGGCG CGCAGCGCCT GATAGACCGG
CTCAAAGACC AGCCGGGCAA GAAGGTGATC TGGGTGCTGT GGGCCGGGGC TGGCAACCCG
TTCAAGATCA ACGACATGGA TCTCAAGCGC TACGGCATCG AGATTGCCAC GGGCGGCAAC
ATCCTGCCCG CGATGGCGGC GTTCAAGGGC ATGCCGGGCA TGGAAGGCGC CACGTATTAC
TACTTCGGCA TCCCGAAGAA CCCGGTGAAC GAGGCATTGG TGTCCATGCA CTACAAGCAG
TTCAAGACGC CGCCAGACTT CTTCACGGCC GGTGGTTTCT CGGCCGCCAT GGCGATCGTG
ACGGCGCTGA AGAAAACCGG CGGCGACACG AAGACCAATA CGCTCATCAA GGCGATGGAG
GGCATGAGCT TCGATACACC GAAGGGCACC ATGACCTTCC GCAAGGAAGA CCACCAAGCC
ATGCAGAGCA TGTACCACTT CCGCATCAAG AACGACCCGG CGTTTGCGTG GGGCGTACCC
GAGCTGGTGC GCGAGATCAA TCCGCAAGAG ATGCAGGTAC CGATCCGCAA TAAGCGCTGA
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| Protein sequence | MHHRSLAARA GGLAAALAAA LTAPLALAQS EIRIAHVYSK TGPLEAYGKQ TQAGLMMGLD
YATGGTMAVA GKKLVVIEKD DQGKPDLGKS QLATAYSDDK ADLAVGPSAS GVALAMLPVA
EEYKKILLVE PAVADSITGD KWNKYIFRTG RNSSQDAIGN AVAIDKPGTL IATLAQDNAF
GRDGVNAFKD AIKTAKLVHE EYLPAATTDF TAGAQRLIDR LKDQPGKKVI WVLWAGAGNP
FKINDMDLKR YGIEIATGGN ILPAMAAFKG MPGMEGATYY YFGIPKNPVN EALVSMHYKQ
FKTPPDFFTA GGFSAAMAIV TALKKTGGDT KTNTLIKAME GMSFDTPKGT MTFRKEDHQA
MQSMYHFRIK NDPAFAWGVP ELVREINPQE MQVPIRNKR
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