| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2043 |
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| Symbol | |
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| ID | 7385036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 2187468 |
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| End bp | 2188307 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643655362 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_002553499 |
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| Protein GI | 222111235 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.944666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCGT CAGGAAATGT GATTGCCGGC GTCCGCACGT TTGTGGGCGA TGTGATCAAC
GGTTTTCTGG AAGTGACACA CAGCGGCTTC GCCCTGCTCG GGCTGGGCGT CGTCTTTGGC
GTGATCACAC TTACGGCACG CCCGGACCTG CGCCAGGCAG GGGAAGAAGA ACTCATGGGC
TGGCTGCAGG CCCGCCAGGA AGCCGTAGTG GGCTTCCCTA TGGAGCCCGC CGCAAGCGAG
CGGGCAGTAG CGCTCAACCC CAAGGAGTTG CCGCGGGAAC AGGCTGCCGT GGCCTACTGG
CTCAGCAAGA AGTACCGCGT GGCGCCCGAA CCGCTGGCGG CACTGGTCAC CGAGGCGTAT
GAAATCGGCG CGCGGACCAA GCTGGATCCC ACCTTGATCC TGGCCGTCAT GGCCGTGGAA
TCGAGCTTCA ACCCGTTTGC ACAAAGCCCG GTAGGTGCGC AAGGCTTGAT GCAGGTGATG
ACGCGCGTGC ATACCGACAA GTACGAAGGC TTTGGTGGGC ACCTGGCGGC ATTCGATCCC
GTGGCCAACC TGCGCGTGGG CGTGAAGGTG CTGCAGGAGT GCATCGCGCG CGCCGGCTCA
CTGGAAGGCG GACTGCGTTA CTACGTCGGC GCAGCCAACC TGCCCGACGA CGGGGGCTAC
GCCGCCAAGG TACTGGCGGA GCATTTCCGG CTGCGCCAGG TCGCCAATGG TCGCACGGGC
GTTTCTCCCG CCGGCCCAGT GAATCCACCT CTCCTGTCCA CCAAGGCTCC TGCCACACCG
GAAGCCGCAC CTGCAACCCC TGCCACTGGC GAGAAGGTGG CCCTGCTGAG CGGCCTCTGA
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| Protein sequence | MTASGNVIAG VRTFVGDVIN GFLEVTHSGF ALLGLGVVFG VITLTARPDL RQAGEEELMG
WLQARQEAVV GFPMEPAASE RAVALNPKEL PREQAAVAYW LSKKYRVAPE PLAALVTEAY
EIGARTKLDP TLILAVMAVE SSFNPFAQSP VGAQGLMQVM TRVHTDKYEG FGGHLAAFDP
VANLRVGVKV LQECIARAGS LEGGLRYYVG AANLPDDGGY AAKVLAEHFR LRQVANGRTG
VSPAGPVNPP LLSTKAPATP EAAPATPATG EKVALLSGL
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