Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2036 |
Symbol | psd |
ID | 7385029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 2176807 |
End bp | 2177658 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643655355 |
Product | phosphatidylserine decarboxylase |
Protein accession | YP_002553492 |
Protein GI | 222111228 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0688] Phosphatidylserine decarboxylase |
TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCTGATC GTATCGCCGT ACTGCCTCAG TACTTGTTAC CCAAACAAGC CCTGACCTCC TTTGCCGGAC GTATGGCGTC TGCGCGTGCG GGCCAATTGA CCACCGCGGT GATCCGCCGG TTTGTGGCGC GCTACGGCGT GGACATGAGC GAGGCGGCCA ATCCGGACAT TGCGAGCTAC GCAACCTTCA ACGACTTCTT CACACGTGCG TTGCGCCCTG GACTGCGCCC GCTTGCCGAT GCTGCGGTGG TATGCCCTGT GGATGGAGCG GTCAGCCAGA TCGGTCCTAT CGAGCAGGAC CAGATCTTCC AAGCCAAGGG CCACCTCTAC TCCACCGCGG CTCTGCTTGG CGGCGACGCC GAAATGGCCG CGCAGTTCCA GGATGGCAGC TTCGCCACCA TCTATCTCAG TCCACGCGAC TACCACCGCA TTCACATGCC GTGCGATGGA CGACTGGTGC GTATGGACCA TGTGCCTGGG GCATTGTTTT CAGTGAACCC GACCACCGCA CGCGGTGTGC CCGGACTGTT TGCGCGCAAC GAACGTGTGG TCTGCCTGTT CGAAACGCCC CTGGGCCCCA TGGCGCTCGT GCTGGTAGGC GCCACCATTG TCGGCAGCAT GGCCACGGTA TGGCACGGCC AGGTCAATCC ACCGCGTACC GGCCAACCGC GCCGCTGGGA TTATGGGGAC CGAGAAGTCG TGCTTCGTCA GGGTGATGAA ATGGGGCGTT TTCTGCTGGG CTCCACGGTC GTGCTGCTGT TTCCCCGCGG CGCAGTTCAG TTCATGCCGG GATGGGAAGC AGCGCGGCCC GTGCGGCTGG GTGAAGCTAT GGCGCACCGC TGCGGCATCT AG
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Protein sequence | MSDRIAVLPQ YLLPKQALTS FAGRMASARA GQLTTAVIRR FVARYGVDMS EAANPDIASY ATFNDFFTRA LRPGLRPLAD AAVVCPVDGA VSQIGPIEQD QIFQAKGHLY STAALLGGDA EMAAQFQDGS FATIYLSPRD YHRIHMPCDG RLVRMDHVPG ALFSVNPTTA RGVPGLFARN ERVVCLFETP LGPMALVLVG ATIVGSMATV WHGQVNPPRT GQPRRWDYGD REVVLRQGDE MGRFLLGSTV VLLFPRGAVQ FMPGWEAARP VRLGEAMAHR CGI
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