| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2025 |
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| Symbol | |
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| ID | 7385017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 2166568 |
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| End bp | 2167803 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643655343 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_002553481 |
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| Protein GI | 222111217 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.718345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTCG CTATCAAAAT GGTAGCTGCT AGCGCAATCT TTGCATGTGC TGGCGGCGCA
TTCGCCCAAA AAGGGGAAAC CGTCAAGATC GCCTGGCTCG ATCCGCTGTC GGGCCTCATG
GCCGCAGTGG GCACCAACCA GCTCAAGAGC TTCCAGTTCA TCTCCGAGGA GTTCAACAAG
AAGAACGCGT CGGGCGTGAA GTTCGAGATC ATCGGCATCG ACAACAAGCT CAGCCCGCAG
GAGACCACCA GCGCACTGCG CTCCGCCATG GACCAGGGTG CGCGCTACGT GGTGCAGGGC
AATGGTTCGG GCCCGGCGCT GGCCATCATC GACGCACTGG AAAAGCACAA CGCGCGCAAC
CCGGGCAAGG AAGTCGTCTA CCTGAACTAC GCGGCGGTGG ACCCTGACCT CACCAACAGC
AAGTGCAGCT ACTGGCACTT CCGCCTGGAT GCCGACACCT CCATGAAGAT GGAGGCCATG
ACCACCTTCA TCAAGGACCA TCCTGAGGTC CAGAAGGTGT ACCTGATCAA CCAGAACTAT
TCGCACGGAC ATCAGGTCTC CAAGTACGCC AAGGAGAACC TCAAGCGCAA GCGCCCTGAC
GTGCAGATCG TGGGCGACGA CCTGCACCCG CTGGCGCAGG TGCGCGACTT CGCGCCCTAC
ATCGCCAAGA TCAAGCAGTC GGGTGCGGAC ACGGTGATCA CGGGCAACTG GGGCTCCGAC
CTCGCGCTGC TCATCAAGGC CGCCAACGAT GCAGGCCTGA ACAACGTGAA CTTCTACACC
TATTACGGCG GCGTGACAGG CAGCCCCACG GCCATGGGCG CAGGCGCCGC GGGCCGGGTG
TACATGGTGT CGTACAACCA CTTGAACCTG CCGGGCGAGA TCGGTCGCAT CATGGGCGAC
TACAAGAAGA AGTTCAACGA CGACATGTAC ACCGGCGCCG TGTACCACGC CTTCTCCATG
CTGGATTCCG CCTTCGTGAA GGCCAAGTCC ACCGACCCCG TGAAGGTGGC TGCTGCGATG
GAAGGCATGA AGTTCAACAG CTTCAACGGC GAAGTGGAGA TGCGCAAGTC CGACCACCAG
TTGCAGCAGG GCCTGTTCGT GACCCGCTGG GAAAAGGCGG GCGACAAGTA TCCCCGCGAT
GCCGAGAACA CCGGCTACAC CTTCGTACCG GTGAAGTACT ACGAGCCCTA TGTGGCCAGC
ACGCCCACGT CGTGCCAGAT GAAGCGGCCT TCCTGA
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| Protein sequence | MKFAIKMVAA SAIFACAGGA FAQKGETVKI AWLDPLSGLM AAVGTNQLKS FQFISEEFNK
KNASGVKFEI IGIDNKLSPQ ETTSALRSAM DQGARYVVQG NGSGPALAII DALEKHNARN
PGKEVVYLNY AAVDPDLTNS KCSYWHFRLD ADTSMKMEAM TTFIKDHPEV QKVYLINQNY
SHGHQVSKYA KENLKRKRPD VQIVGDDLHP LAQVRDFAPY IAKIKQSGAD TVITGNWGSD
LALLIKAAND AGLNNVNFYT YYGGVTGSPT AMGAGAAGRV YMVSYNHLNL PGEIGRIMGD
YKKKFNDDMY TGAVYHAFSM LDSAFVKAKS TDPVKVAAAM EGMKFNSFNG EVEMRKSDHQ
LQQGLFVTRW EKAGDKYPRD AENTGYTFVP VKYYEPYVAS TPTSCQMKRP S
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