| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2022 |
|---|
| Symbol | |
|---|
| ID | 7385014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2163413 |
|---|
| End bp | 2164195 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643655340 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002553478 |
|---|
| Protein GI | 222111214 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0830509 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGACC AGGCAACCTA TGCGTTGGAG CTGCGCGACC TGCGCAAGAG CTTCGGCAAG
ACCGAGATCA TCCGCGGCGC CAACCTGGCG GTACGGCCCG GCGAACGCGT GGCCGTCATC
GGACCCAACG GCGCGGGCAA GTCCACGCTG TTCAACCTCG TCAGCGGGCG GTTCGCGCCC
ACCAGCGGCG AGGTGCTGCT GCACGGCGCG CGCATCGACG GCAAGCAGCC GTTCGAGATC
AACCGCATGG GGCTGTCGCG CAGCTTCCAG ATCACCAACA TCTTTCCCAA GCTCAGCGTG
TTCGAGAACC TGCGCTGCGG CGTGCTGTGG AGCCTGGGGT ACCGCTATGC GTTCTGGCGC
TTCCTGTCCA GGTTGCAGGA TGCCAACGAC CGGGCCACGC AGCTCATGGA GATGATCAAG
CTGGACAAGA AGCGCGACAC CCTGGCCATG AACCTGACCT ATGCCGAGCA GCGCGCTCTG
GAGATCGGGA TCACCATCGC CGGCGGCGCC AGCGTCATCC TGCTGGATGA GCCCACTGCG
GGTATGAGCA AGAGCGAGAC CACGCGCTTC ATCCACCTCA TCAAGGAGGT CACGCAGGGC
CGCACCCTGC TGACCGTGGA GCACGACATG GGCGTGGTCT TCGGCCTGGC CGACAAGATC
GCCGTGGTGG TGTATGGCGA GGTGATCGCC TTCGACACGC CCGAGAACGT ACGCGCCAAC
CCGCGCGTGC AGGAAGCCTA CCTGGGCTCC GTCATTGCCG CGCAGCAGGC CGGGGGACAC
TGA
|
|---|
| Protein sequence | MADQATYALE LRDLRKSFGK TEIIRGANLA VRPGERVAVI GPNGAGKSTL FNLVSGRFAP
TSGEVLLHGA RIDGKQPFEI NRMGLSRSFQ ITNIFPKLSV FENLRCGVLW SLGYRYAFWR
FLSRLQDAND RATQLMEMIK LDKKRDTLAM NLTYAEQRAL EIGITIAGGA SVILLDEPTA
GMSKSETTRF IHLIKEVTQG RTLLTVEHDM GVVFGLADKI AVVVYGEVIA FDTPENVRAN
PRVQEAYLGS VIAAQQAGGH
|
|---|
| |