Gene Dtpsy_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_2021 
Symbol 
ID7385013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp2162714 
End bp2163409 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content64% 
IMG OID643655339 
ProductABC transporter related 
Protein accessionYP_002553477 
Protein GI222111213 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0684522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAAG TCGAAAACCT GCACGCCTAC TACGGCAAGA GCCATGTGCT GCACGGCGTG 
GGATTTGACG TGCAGCCGGG CGAGATCGTC GCGCTGCTGG GCCGCAACGG CTCCGGCCGC
TCCACCGCGG CCAAGGCCGT GATGGGCCTG GTGGACTGGC AGGGCACGCT GCAGTGGAAG
GGCCAGGATC TCAATGGCAG GAAGGCCTAC GAGATCGCCC ATCTGGGCAT CGGCTACGTG
CCCGAAAGCC GCGACGTATT TCCCAACCTC ACCGTGCACC AGAACCTGCT GCTGGGCCAG
AAGGGCAGTG GCAGGGATAG CCGCTGGAGC TTTGACGACA TGTACGAGAT GTTCCCGCGC
CTGAAGGAGC GCCGCAACAT CGAGGCGGGC GTCATGTCCG GCGGCGAGCA GCAGATGCTG
ACCCTGTGCC GCACGCTCAT GGGCGACCCG GACCTCATCA TCATCGACGA GCCCACCGAG
GGGCTGGCGC CCAAAATCGT CGAACTGGTG GGCGAGTACC TGACGCGGCT CAAGCAGCGG
GGCATCTCCG TGCTGCTCAT CGAGCAAAAA CTCACCATCG CTATGACCAT CTCCGACCGC
GCGCTGGTCA TGGGGCACGG CAGCATCGTC TTTCAGGGCA CGCCCGACGA GCTGCGTGCC
AACAGCTATG TACGCAAGGA GTGGCTGGAG GTTTGA
 
Protein sequence
MLKVENLHAY YGKSHVLHGV GFDVQPGEIV ALLGRNGSGR STAAKAVMGL VDWQGTLQWK 
GQDLNGRKAY EIAHLGIGYV PESRDVFPNL TVHQNLLLGQ KGSGRDSRWS FDDMYEMFPR
LKERRNIEAG VMSGGEQQML TLCRTLMGDP DLIIIDEPTE GLAPKIVELV GEYLTRLKQR
GISVLLIEQK LTIAMTISDR ALVMGHGSIV FQGTPDELRA NSYVRKEWLE V