Gene Dtpsy_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_2020 
Symbol 
ID7385012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp2160422 
End bp2162521 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content66% 
IMG OID643655338 
Product3-hydroxyacyl-CoA dehydrogenase NAD-binding 
Protein accessionYP_002553476 
Protein GI222111212 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.303274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCTG AATACCAGGT CCACGGCGAC GTGGCCGTGA TCACCCTCAA CAACCCGCCC 
GTCAACGGGC TTGGCCTGGC CACGCGCCAG GGCGTCGTCG ATGGCCTCGA TCGCGCCCAG
GCCGACGCGG CCGTCAAGGC CATCGTCATC ACCGGCGCGG GCGGCGCCTT CTCGGGTGGC
GCCGACATCA AGGAGTTCGG CACCGACAAG TCGCTGCAGG AGCCCAATCT GCACTCCGTC
ATCAACGCCG TCGAGTACTG CACCAAGCCC GTGGTGGCTG TCATCCACAC CGTCTGCATG
GGCGGCGGGC TGGAGCTGGC CCTGGGCTGC CACTACCGTG TGGCCGCGCC CGGCTGCAAC
GTGGCGCTGC CCGAGGTGAA GCTGGGCATC CTGCCCGGCG CGGGCGGCAC GCAGCGCCTG
CCGCGCGTGG TGGGGGTGGA GGCAGCGCTG AACATGATCG TCAGCGGCGA GCCGGTCAAG
AGCGAGATGA TCGGCGCCGT GCCCGGCCAG AAGCTGTTCG ACAAGATGAC CGCGTCGCCC
GAGTCGCTGG CCGAGGAGGC GCTGGCCTTC GCCCGAAGCG TGGCGGACGT GCGCCCGCTG
CCGCTGGTAC GCAACCTGCC GTGCAAGCAC CCCGAGGGCG ATGCGTACTT CCAGTTCGCA
CGCAACATGG TCAAGGGCAT GGCCAAGAAC TTCCCCGCGC CCGCCAAGTG CGTGGACGCC
GTGGAGGCGG CCACCAAGCG CAAGTTTGCC GACGGCCTGG CGTACGAGCG CGAGCTGTTC
ATCAACCTGA TGTGGACGCC CGAGTCGCGC GCGCTGCGCC ACCTGTTCTT TGCGGAGCGT
GCCGCGAGCA AGATCCCCGA CGTCCCGTCC GAGACTCCCA AGCGGGATAT CAAGAAGGTC
GGCGTGATCG GTGCGGGCAC CATGGGTGGC GGCATCAGCA TGAACTTCCT GAACGCGGGC
ATCCCCGTGA CCATCCTGGA GATGAAGCAG GAGGCGCTGG ACCGCGGCAT CGGCACGATC
CAGAAGAATT ACGAAGCCCA GGTCAAGAAG GGCAAGCTCA AAGAAGACAA GTACCAGCAG
CGCATGGCCC TGCTGTCCAC TACGCTGAAC TATGCCGACC TGAAGGACTG CGACCTGATC
ATTGAGGCCG TGTTCGAGGA ACTGGGCGTG AAGGAAGCCG TGTTCAAGCA GCTCGACGCC
GTGGCCAAGC CCGGCGCCAT CCTGGCGTCC AACACCTCCA CGCTGGACGT GGACAAAATC
GCCGCCTTCA CCCAGCGTCC GCAGGACGTG GTGGGCATGC ACTTCTTCAG TCCCGCCAAC
GTGATGAAGC TGCTGGAAGT GGTGCGCGGC AAGGCCACGG CCAAGGACGT GCTGGCCACC
GTGATGGCCT TGGCCAAGAA GATCAAGAAG ACGGCCGTGG TCTCTGGCGT GTGCGACGGT
TTCATCGGCA ACCGCATGAT CGAGCGCTAC AGCCAGCAGG CCGGCTTCCT GCTGGACGAA
GGCTGCACGC CCCAGCAGGT GGACAAGGCC ATCGAGAAGT TCGGCTTCGC CATGGGCCCG
TTCCGCATGG GCGACCTGGC CGGCAACGAC ATCGGCTGGG CTATCCGCAA GCGCCGCGCC
GTCGAGCAGC CCGACATGAA GTACAGCAAG ACGGCCGACC TGCTGTGCGA GATGGGACGC
TTCGGCCAGA AGACCGGGGC GGGCTGGTAC GACTACCAGG CTGGCAAGCG TGACGCGATT
CCCAGCGACG TGGTGAACCA GATGATCGAG GCGCACCGCA AGGCCCTGGG CATCACGCCG
CGCAAGGTGA GCGACGAGGA GATCGTGCAG CGCCTGGTCT ATGCGCTGGT CAACGAGGGC
GCCAAGATCC TGGAAGAGGG CATTGCCAGC AAGTCGGGCG ACATCGACAT GGTGTACCTG
ACCGGCTACG GCTTCCCCAT CCACCGCGGC GGTCCCATGC ACTACGCCAG CGAAGTGGGC
CTGTTCAACG TGGTGCAGTC CATGAAGCGC TTTGCCCGCA ACCCGCTGGA TGACGCACGC
GCCTGGGAGC CCGCGCCGCT GCTGGCCCGG CTGGCCGCCG AAGGCAAGGC CTTTGCCTGA
 
Protein sequence
MTAEYQVHGD VAVITLNNPP VNGLGLATRQ GVVDGLDRAQ ADAAVKAIVI TGAGGAFSGG 
ADIKEFGTDK SLQEPNLHSV INAVEYCTKP VVAVIHTVCM GGGLELALGC HYRVAAPGCN
VALPEVKLGI LPGAGGTQRL PRVVGVEAAL NMIVSGEPVK SEMIGAVPGQ KLFDKMTASP
ESLAEEALAF ARSVADVRPL PLVRNLPCKH PEGDAYFQFA RNMVKGMAKN FPAPAKCVDA
VEAATKRKFA DGLAYERELF INLMWTPESR ALRHLFFAER AASKIPDVPS ETPKRDIKKV
GVIGAGTMGG GISMNFLNAG IPVTILEMKQ EALDRGIGTI QKNYEAQVKK GKLKEDKYQQ
RMALLSTTLN YADLKDCDLI IEAVFEELGV KEAVFKQLDA VAKPGAILAS NTSTLDVDKI
AAFTQRPQDV VGMHFFSPAN VMKLLEVVRG KATAKDVLAT VMALAKKIKK TAVVSGVCDG
FIGNRMIERY SQQAGFLLDE GCTPQQVDKA IEKFGFAMGP FRMGDLAGND IGWAIRKRRA
VEQPDMKYSK TADLLCEMGR FGQKTGAGWY DYQAGKRDAI PSDVVNQMIE AHRKALGITP
RKVSDEEIVQ RLVYALVNEG AKILEEGIAS KSGDIDMVYL TGYGFPIHRG GPMHYASEVG
LFNVVQSMKR FARNPLDDAR AWEPAPLLAR LAAEGKAFA