Gene Dtpsy_1987 details

Gene Information

• Locus tag: Dtpsy_1987
• Symbol: tmk
• ID: 7382106
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: -
• Start bp: 2123459
• End bp: 2124112
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643655305
• Product: thymidylate kinase
• Protein accession: YP_002553443
• Protein GI: 222111179
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0125] Thymidylate kinase
• TIGRFAM ID: [TIGR00041] thymidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAACG GCGCATTCAT CACCTTCGAG GGCATCGACG GCGCGGGCAA GTCCTCGCAC 
ATCGACGCGC TGGCCCAGGC GCTGCGCGCT GCGGGGCATA CCGTGACCCT GACGCGCGAG 
CCTGGCGGCA CACCGCTGGC CGAGAAGCTG CGCGAGATGC TGCTGCACGA CAGCATGGAC 
GCGCTGACCG AAACGCTGCT GGTGTTTGCC GCGCGGCGCG ACCATCTGCG CTGCGTGATC 
GAGCCGGCGC TGGCACGCGG CGAGGTGGTG TTGTGCGACC GGTTCACCGA TGCCACCTTT 
GCCTACCAGG GCGCAGGGCG CGGCTTCGAT CTGGAGGTGC TATCGTATAT GGAGCGCCTT 
GCGCAGACTG GTGTTGGTCT GCAGCCTGAT TTGATGCGAA ACCCGGACCT CACGCTGTGG 
TTCGACGTGC CACCTGAGGT GGCCGCGCAG CGCCTGTCTG CCGCGCGCGC GCCCGACCGC 
TTCGAGTCGC AGCCCGTGGA GTTCTTCACC CGCGTGGCGC GCGGCTATGC CGACCGCGCC 
GCGGGAGCGC CGCAGCGCTT TGCGCGCATC GACTCGTCGC AGCCGCGCGA GCAGGTTGCC 
GCGCAGCTGC GTGCCGTGGT GGCCGCACGC GGCTGGCTGG CGCAGACGCC ATGA 

 

Protein sequence

MTNGAFITFE GIDGAGKSSH IDALAQALRA AGHTVTLTRE PGGTPLAEKL REMLLHDSMD 
ALTETLLVFA ARRDHLRCVI EPALARGEVV LCDRFTDATF AYQGAGRGFD LEVLSYMERL 
AQTGVGLQPD LMRNPDLTLW FDVPPEVAAQ RLSAARAPDR FESQPVEFFT RVARGYADRA 
AGAPQRFARI DSSQPREQVA AQLRAVVAAR GWLAQTP