| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1927 |
|---|
| Symbol | |
|---|
| ID | 7382045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 2062260 |
|---|
| End bp | 2064047 |
|---|
| Gene Length | 1788 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643655244 |
|---|
| Product | nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein |
|---|
| Protein accession | YP_002553383 |
|---|
| Protein GI | 222111119 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.273191 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACCAGT ACACCGAATT CGACCGCCAG TTCGTCCACC TGCGCGCCCA GCAATTCCGC
GATCAGCTCG AACGCTGGCA GCGCGGCGAG TTGACCGACG AGCAACTGCT GCCCCTGCGC
CTGCAAAACG GCTGGTACAT CCAGCGCTAC GCGCCCATGG CCCGCATCGC CGTGCCCTAT
GGCGACATCA ACAGCGCTCA GCTGCGCATG CTGGCCCACA TCGCCCGCGA ATACGACCGC
CCTACGCCCG AGCTGCTGGC CCATGCCCAG GCCACGCAGG ACCAGCTGCA GGCCGCCCAG
CCGGGCCTGA CACTGGCCGC GCCCCCGCTG CGCTACGGCT ACGGCCACTT CACCACGCGC
ACCAACGTGC AGTTCAACTG GATTCCCATC ACCCGCGCGG CCGACGTGAT GGACCTGCTG
GCCAGCGTGC ACATGCACGG CATCCAGACC AGCGGCAACG ACATCCGCAA CATCACCTGC
GAGGCCTACG CCGGCATCGC CGAGGACGAG ATCGTGGACA CCCGGCCGTT CGCCGAGATC
ACGCGCCAGT GGAGTTCGCT GCACCCCGAG TTCACCTACC TGCCGCGCAA GTTCAAGATC
GCCTTCAACG GCGCCGCGGA AGACCGTGCC GCCACCGGCT GGTATGACAT CGGCCTGCAG
GCGCTGAAGA ACGCGGCTGG CGAGGTGGGC TTTGCCGTCA AGGTGGGCGG CGGCATGGGG
CGCACGCCCG TCATCGGCAC CGTGGTGCGT GAATTTCTGC CGTGGGACCA GCTGCTGAAC
TACATCGAAG CCATCGTGCG CGTGTACAAC AGCTACGGCC GCCGCGACAA CAAGTGGAAG
GCGCGCATCA AGATCCTGGT CAAGAGCGAA GGCCAGCAGT TCATCGACGC GGTGGAGGCC
GAATACCGCG CCATCCTGGA GCAGGACGGC GCCCCCCACA CCATCACCCA GGCCGAGCTG
GACCGCGTGA CCGGCCATTT CGTCGTGCCA CCACTGCGGC CCGCCGGCCG GCCGCACGGC
GTGAACACCT CCGGCCAGCT GTACCAGCGC TGGCTGCAGC AGAACGTGCG CGGCCACCGC
ATGGCCGGCC TGAAGGCGGT GACACTGTCG TTCAAGCGCG TGGGCTTTGC GCCCGGCGAT
GCCGACGGCG ACACGCTGGA CGCCCTGGCC CAGCTGGCCG ACCAGTTCAG CGCCGGCGAG
GCGCGCCTGA CGCACGAGCA GAACCTGCTG CTGCCCTGGG TGCACGAAGC CGACCTGCCC
GCGCTGTACG AGGCCGCGCG CAAGCTGGGC CTGGCGCAGC CCAACATCGG CCTGCTGACG
GACATGATCG CCTGCCCGGG CGGCGACTTC TGCTCACTGG CCAACGCGCG TTCGCTGCCC
ATCGCCGCGG CGATCACCGA GCGCTACCAG GATTTGGACG AACTGTTCGA CATCGGCCCC
ATCGACCTGC ACATGAGCGG CTGCATCAAC AGCTGCGGCC ACCACCACAG CGGCCACATC
GGCATCCTGG GCGTGGACAA GGACGGCAAG GAGTGGTACC AGATCACGCT GGGCGGCTCC
GACGGTACGC AGCTGTCCGG CCCCGCCATT GGCGGCAAGG TGGTCGGCCC GTCGTTCTCG
GCCGCCGAAG TGCCCGACGT GATCGAGGCG CTGCTGGACA CCTACCGCGC GCTGCGCAAG
GGCAACGAGC TGTTCATCGA CACCCTGCGC CGCGTGGGCC AGGACCCGTT CAAGGCCGCC
GCCAACGGCG CGCGCCATCC CAAGGCGGCC GAAGAAGCCG TGGCCTGA
|
|---|
| Protein sequence | MYQYTEFDRQ FVHLRAQQFR DQLERWQRGE LTDEQLLPLR LQNGWYIQRY APMARIAVPY
GDINSAQLRM LAHIAREYDR PTPELLAHAQ ATQDQLQAAQ PGLTLAAPPL RYGYGHFTTR
TNVQFNWIPI TRAADVMDLL ASVHMHGIQT SGNDIRNITC EAYAGIAEDE IVDTRPFAEI
TRQWSSLHPE FTYLPRKFKI AFNGAAEDRA ATGWYDIGLQ ALKNAAGEVG FAVKVGGGMG
RTPVIGTVVR EFLPWDQLLN YIEAIVRVYN SYGRRDNKWK ARIKILVKSE GQQFIDAVEA
EYRAILEQDG APHTITQAEL DRVTGHFVVP PLRPAGRPHG VNTSGQLYQR WLQQNVRGHR
MAGLKAVTLS FKRVGFAPGD ADGDTLDALA QLADQFSAGE ARLTHEQNLL LPWVHEADLP
ALYEAARKLG LAQPNIGLLT DMIACPGGDF CSLANARSLP IAAAITERYQ DLDELFDIGP
IDLHMSGCIN SCGHHHSGHI GILGVDKDGK EWYQITLGGS DGTQLSGPAI GGKVVGPSFS
AAEVPDVIEA LLDTYRALRK GNELFIDTLR RVGQDPFKAA ANGARHPKAA EEAVA
|
|---|
| |