Gene Dtpsy_1925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_1925 
Symbol 
ID7382043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand+ 
Start bp2059485 
End bp2060150 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content64% 
IMG OID643655242 
Productprotein of unknown function UPF0126 
Protein accessionYP_002553381 
Protein GI222111117 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.293992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCCGT CGGTGTCATT GCTGGACTCG TTCCAGTTCT CACAGTTCAC CACCCTGCTG 
GTGATCTACC TTGTGGCCAT CACGGCCGAG GCCATGTCTG GCGCGCTGGC CGCAGGCCGG 
CGCAACATGG ACATCTTCGG TGTCAGCGTG ATCGCCTTTG TGACCGCGCT GGGCGGCGGC 
ACCATCCGTG ACATGGTGCT GGGCCACTAC CCGATCGGCT GGACACAGCA CCCGGAATAC 
GTGTACCTGG TGATCTCCGC AGGCCTGCTG ACGACGGTGG TGGCGCGCTA CCTGCACCGG 
ATCAAGCGCG TGTTCCTGCT GCTGGACGCC ATGGGGCTGA TCGCGTTCTC ACTGATCGGA 
TGCAACGTGG CCCTGGAACT GGGCTACCCG CCCGTGGTGG TGGTGATGTC CGGCATGCTC 
ACGGGCATCA GCGGCGGCAT CCTGCGCGAC GTGCTGTGCA ACCAGGTGCC CGTGGTCTTT 
CGGCGCGAGC TGTACGCCAG CGTGTCCCTG GCCGTGTGCC TGCTGTTCCT GGGACTGCGC 
ACGATGGAAG TGGAAAACAA CCTCAGCACT TTGGTGTGCT TCGCCGCCGG CCTGGCGCTG 
CGGCTACTGG CACTGCACTA CCACTGGCGC CTGCCGGTGT TCTCGTACCA GCAGCGCTGG 
GAATGA
 
Protein sequence
MLPSVSLLDS FQFSQFTTLL VIYLVAITAE AMSGALAAGR RNMDIFGVSV IAFVTALGGG 
TIRDMVLGHY PIGWTQHPEY VYLVISAGLL TTVVARYLHR IKRVFLLLDA MGLIAFSLIG 
CNVALELGYP PVVVVMSGML TGISGGILRD VLCNQVPVVF RRELYASVSL AVCLLFLGLR 
TMEVENNLST LVCFAAGLAL RLLALHYHWR LPVFSYQQRW E